tested new fiel calibration with ers

src/main/java/com/elphel/imagej/common/ShowDoubleFloatArrays.java

@@ -85,7 +85,7 @@ import ij.process.ImageProcessor;
 
         }
       }
-      ImagePlus imp_stack = new ImagePlus(title, array_stack);
+      ImagePlus imp_stack = new ImagePlus(title, array_stack); // stack is empty
       imp_stack.getProcessor().resetMinAndMax();
       imp_stack.show();
       return;

src/main/java/com/elphel/imagej/tileprocessor/CLTPass3d.java

@@ -34,7 +34,12 @@ public class CLTPass3d{
 		private  double [][]    disparity_sav; // saved disparity
 		private  int    [][]    tile_op_sav;   // saved tile_op
 		public   double [][]    disparity_map =  null; // add 4 layers - worst difference for the port
+		public   double [][]    lazy_eye_data = null;
+		public   int            lma_cluster_size = -1;
+		public   boolean []     lazy_eye_force_disparity = null;
+
 		double []               calc_disparity = null; // composite disparity, calculated from "disparity", and "disparity_map" fields
+
 		                                       // using horizontal features and corr_magic_scale
 		// used directly in TileProcessor.compositeScan()
 		double []               calc_disparity_hor =   null; // composite disparity, calculated from "disparity", and "disparity_map" fields
@@ -55,7 +60,7 @@ public class CLTPass3d{
 		public  boolean []      border_tiles =         null; // these are border tiles, zero out alpha
 		public  boolean []      selected =             null; // which tiles are selected for this layer
 		public  double [][][][] texture_tiles;
-		public double [][]      max_tried_disparity =  null; //[ty][tx] used for combined passes, shows maximal disparity for this tile, regardless of results
+		public  double [][]      max_tried_disparity =  null; //[ty][tx] used for combined passes, shows maximal disparity for this tile, regardless of results
 		public  boolean         is_combo =             false;
 		public  boolean         is_measured =          false;
 		public  String          texture = null; // relative (to x3d) path
@@ -235,6 +240,31 @@ public class CLTPass3d{
 
 		}
 
+		public boolean [] getLazyEyeForceDisparity() {
+			return lazy_eye_force_disparity;
+		}
+
+		public void setLazyEyeForceDisparity(boolean [] lazy_eye_force_disparity) {
+			this.lazy_eye_force_disparity = lazy_eye_force_disparity;
+		}
+
+		public double [][] getLazyEyeData() {
+			return lazy_eye_data;
+		}
+
+		public void setLazyEyeData(double [][] lazy_eye_data) {
+			this.lazy_eye_data = lazy_eye_data;
+		}
+
+		public int getLazyEyeClusterSize() {
+			return lma_cluster_size;
+		}
+		public void setLazyEyeClusterSize(int lma_cluster_size) {
+			this.lma_cluster_size = lma_cluster_size;
+		}
+
+
+
 		public boolean [] getSelected(){
 			return selected;
 		}

src/main/java/com/elphel/imagej/tileprocessor/Correlation2d.java

@@ -1948,13 +1948,13 @@ public class Correlation2d {
     	}
 
 
-    	if (debug_graphic) {
+    	if (debug_graphic && (dbg_corr != null)) {
 
     	    double [][] dbg_corrs = repackCluster(
     	    		dbg_corr,
     	    		clust_width);
 
-    		(new ShowDoubleFloatArrays()).showArrays(
+    		(new ShowDoubleFloatArrays()).showArrays( // empty array
     				dbg_corrs,
     				dbg_out_width,
     				dbg_out_height,

src/main/java/com/elphel/imagej/tileprocessor/ImageDttParameters.java

@@ -99,7 +99,7 @@ public class ImageDttParameters {
 	public double  corr_wndx_blur =         5.0;   // 100% to 0 % vertical transition range
 
 // LMA parameters
-	public double  lma_disp_range =         2.0;   // disparity range to combine in one cluster (to mitigate ERS
+	public double  lma_disp_range =          5.0;   // disparity range to combine in one cluster (to mitigate ERS
 // LMA single parameters
 	public boolean lmas_gaussian =           false; // model correlation maximum as a Gaussian (false - as a parabola)
 	public boolean lmas_adjust_wm =          true;  // used in new for width
@@ -110,16 +110,16 @@ public class ImageDttParameters {
 	public double  lmas_poly_str_min =       0.05;  // ignore tiles with poly strength (scaled) below
 
 	public double  lmas_lambda_initial =     0.03;   //
-	public double  lmas_rms_diff =           0.001; //
+	public double  lmas_rms_diff =           0.0003; //
 	public int     lmas_num_iter =          20;     //
 	// Filtering and strength calculation
-	public double  lmas_max_rel_rms =        0.2;   // maximal relative (to average max/min amplitude LMA RMS) // May be up to 0.3)
-	public double  lmas_min_strength =       1.0;   // minimal composite strength (sqrt(average amp squared over absolute RMS)
-	public double  lmas_min_ac =             0.03;  // minimal of a and C coefficients maximum (measures sharpest point/line)
+	public double  lmas_max_rel_rms =        0.3;   // maximal relative (to average max/min amplitude LMA RMS) // May be up to 0.3)
+	public double  lmas_min_strength =       0.7;   // minimal composite strength (sqrt(average amp squared over absolute RMS)
+	public double  lmas_min_ac =             0.02;  // minimal of a and C coefficients maximum (measures sharpest point/line)
 	public double  lmas_max_area =           0.0;  // maximal half-area (if > 0.0)
 
 	public boolean lma_gaussian =           false; // model correlation maximum as a Gaussian (false - as a parabola)
-	public boolean lma_second =             false;  // re-run LMA after removing weak/failed tiles
+	public boolean lma_second =             true;  // re-run LMA after removing weak/failed tiles
 	public boolean lma_second_gaussian =    false;  // re-run after removing weal/failed in Gaussian mode
 	public boolean lma_adjust_wm =          true;  // used in new for width
 	public boolean lma_adjust_wy =          true;  // false; // used in new for ellipse
@@ -128,7 +128,7 @@ public class ImageDttParameters {
 	public boolean lma_adjust_ag =          true;  // used in new for gains
 
 // new LMA parameters
-	public double  lma_wnd =                1.5;   // raise cosine window to this power (1.0 - just 2D cosine)
+	public double  lma_wnd =                1.0; //1.5;   // raise cosine window to this power (1.0 - just 2D cosine)
 	public double  lma_min_wnd =            0.4;   // divide values by the 2D correlation window if it is >= this value for finding maximums and convex areas
 	public double  lma_wnd_pwr =            0.8;   // Raise window for finding a maximum and a convex region to this power
 	public int     lma_hard_marg =          1;     // Zero out this width margins before blurring
@@ -148,13 +148,13 @@ public class ImageDttParameters {
 	public double  lma_lambda_scale_good =  0.5;   //
 	public double  lma_lambda_scale_bad =   8.0;   //
 	public double  lma_lambda_max =       100.0;   //
-	public double  lma_rms_diff =           0.001; //
-	public int     lma_num_iter =          20;     //
+	public double  lma_rms_diff =           0.003; //
+	public int     lma_num_iter =          10;     //
 	// Filtering and strength calculation
-	public double  lma_max_rel_rms =        0.12;  // maximal relative (to average max/min amplitude LMA RMS) // May be up to 0.3)
-	public double  lma_min_strength =       1.25;  // minimal composite strength (sqrt(average amp squared over absolute RMS)
-	public double  lma_min_ac =             0.15;  // minimal of a and C coefficients maximum (measures sharpest point/line)
-	public double  lma_max_area =           30.0;  // maximal half-area (if > 0.0)
+	public double  lma_max_rel_rms =        0.2;  // maximal relative (to average max/min amplitude LMA RMS) // May be up to 0.3)
+	public double  lma_min_strength =       1.0;  // minimal composite strength (sqrt(average amp squared over absolute RMS)
+	public double  lma_min_ac =             0.05;  // minimal of a and C coefficients maximum (measures sharpest point/line)
+	public double  lma_max_area =           45.0;  // maximal half-area (if > 0.0)
 
 	public double  lma_str_scale =          0.2;   // convert lma-generated strength to match previous ones - scale
 	public double  lma_str_offset =         0.05;  // convert lma-generated strength to match previous ones - add to result
@@ -162,8 +162,8 @@ public class ImageDttParameters {
 
 	// Lazy eye results interpretation
 	public boolean lma_diff_xy =            true;  // convert dd/nd to x,y
-	public double  lma_diff_minw =          0.5;   // minimal weight to keep
-	public double  lma_diff_sigma =         1.0;   // blur differential data (relative to the cluster linear size)
+	public double  lma_diff_minw =          0.07;   // minimal weight to keep
+	public double  lma_diff_sigma =         2.0;   // blur differential data (relative to the cluster linear size)
 
 	public int     lma_debug_level =        0;     //
 	public int     lma_debug_level1 =       0;     //

src/main/java/com/elphel/imagej/tileprocessor/TwoQuadCLT.java

@@ -8255,7 +8255,7 @@ if (debugLevel > -100) return true; // temporarily !
 			final boolean    updateStatus,
 			final int        debugLevel)  throws Exception
 	{
-		//		  final boolean    batch_mode = clt_parameters.batch_run;
+		// final boolean    batch_mode = clt_parameters.batch_run;
 		// Reset dsi data (only 2 slices will be used)
 		this.dsi =           new double [DSI_SLICES.length][];
 		this.dsi_aux_from_main =   null; // full data, including rms, fg and bg data