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Elphel
imagej-elphel
Commits
b3e9f364
Commit
b3e9f364
authored
Feb 19, 2024
by
Andrey Filippov
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tested LMA converging
parent
c3fb4172
Changes
3
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3 changed files
with
139 additions
and
69 deletions
+139
-69
OrthoMap.java
src/main/java/com/elphel/imagej/orthomosaic/OrthoMap.java
+17
-0
OrthoMapsCollection.java
...va/com/elphel/imagej/orthomosaic/OrthoMapsCollection.java
+98
-69
OrthoPairLMA.java
...main/java/com/elphel/imagej/orthomosaic/OrthoPairLMA.java
+24
-0
No files found.
src/main/java/com/elphel/imagej/orthomosaic/OrthoMap.java
View file @
b3e9f364
...
...
@@ -861,4 +861,21 @@ public class OrthoMap implements Comparable <OrthoMap>, Serializable{
}
return
true
;
}
public
static
double
[][]
combineAffine
(
double
[][]
ref_affine
,
double
[][]
other_affine
){
Matrix
m_ref
=
new
Matrix
(
ref_affine
);
Matrix
m_other
=
new
Matrix
(
other_affine
);
Matrix
A1
=
m_ref
.
getMatrix
(
0
,
1
,
0
,
1
);
Matrix
A2
=
m_other
.
getMatrix
(
0
,
1
,
0
,
1
);
Matrix
B1
=
m_ref
.
getMatrix
(
0
,
1
,
2
,
2
);
Matrix
B2
=
m_other
.
getMatrix
(
0
,
1
,
2
,
2
);
Matrix
A
=
A2
.
times
(
A1
);
Matrix
B
=
A2
.
times
(
B1
).
plus
(
B2
);
double
[][]
affine
=
{
{
A
.
get
(
0
,
0
),
A
.
get
(
0
,
1
),
B
.
get
(
0
,
0
)},
{
A
.
get
(
1
,
0
),
A
.
get
(
1
,
1
),
B
.
get
(
1
,
0
)}};
return
affine
;
}
}
src/main/java/com/elphel/imagej/orthomosaic/OrthoMapsCollection.java
View file @
b3e9f364
...
...
@@ -533,75 +533,104 @@ public class OrthoMapsCollection implements Serializable{
// uses fixed_size gpu image size
// TDCorrTile [] td_corr_tiles =
TpTask
[][]
tp_tasks
=
new
TpTask
[
2
][];
double
[][][]
vector_field
=
ComboMatch
.
rectilinearVectorField
(
//rectilinearCorrelate_TD( // scene0/scene1
clt_parameters
,
// final CLTParameters clt_parameters,
gpu_pair_img
,
// final float [][] fpixels, // to check for empty
gpu_width
,
// final int img_width,
woi
,
// Rectangle woi, // if null, use full GPU window
affines_gpu
,
// final double [][][] affine, // [2][2][3] affine coefficients to translate common to 2 images
tp_tasks
,
// TpTask [][] tp_tasks_o,
false
,
// final boolean batch_mode,
debugLevel
);
// final int debugLevel);
// may use tl_rect_metric to remap to the original image
double
[][]
tile_centers
=
new
double
[
vector_field
[
0
].
length
][];
int
tilesX
=
gpu_width
/
GPUTileProcessor
.
DTT_SIZE
;
for
(
TpTask
task:
tp_tasks
[
1
])
{
int
ti
=
task
.
getTileY
()
*
tilesX
+
task
.
getTileX
();
tile_centers
[
ti
]
=
task
.
getDoubleCenterXY
();
}
if
(
show_tile_centers
){
double
[][]
dbg_img
=
new
double
[
6
][
tile_centers
.
length
];
String
[]
dbg_titles
=
{
"cX"
,
"cY"
,
"px0"
,
"py0"
,
"px1"
,
"py1"
};
for
(
int
i
=
0
;
i
<
dbg_img
.
length
;
i
++)
Arrays
.
fill
(
dbg_img
[
i
],
Double
.
NaN
);
for
(
int
t
=
0
;
t
<
tp_tasks
[
0
].
length
;
t
++)
{
TpTask
task0
=
tp_tasks
[
0
][
t
];
TpTask
task1
=
tp_tasks
[
1
][
t
];
int
ti
=
task0
.
getTileY
()
*
tilesX
+
task0
.
getTileX
();
dbg_img
[
0
][
ti
]
=
task0
.
getDoubleCenterXY
()[
0
];
// same for task0, task1
dbg_img
[
1
][
ti
]
=
task1
.
getDoubleCenterXY
()[
1
];
dbg_img
[
2
][
ti
]
=
task0
.
getXY
()[
0
][
0
];
dbg_img
[
3
][
ti
]
=
task0
.
getXY
()[
0
][
1
];
dbg_img
[
4
][
ti
]
=
task1
.
getXY
()[
0
][
0
];
dbg_img
[
5
][
ti
]
=
task1
.
getXY
()[
0
][
1
];
}
// getXY()
ShowDoubleFloatArrays
.
showArrays
(
dbg_img
,
tilesX
,
tile_centers
.
length
/
tilesX
,
true
,
"tile_centers"
,
dbg_titles
);
}
int
num_tries
=
5
;
double
prev_rms
=
Double
.
NaN
;
double
rel_improve
=
1
E
-
3
;
for
(
int
ntry
=
0
;
ntry
<
num_tries
;
ntry
++)
{
double
[][][]
vector_field
=
ComboMatch
.
rectilinearVectorField
(
//rectilinearCorrelate_TD( // scene0/scene1
clt_parameters
,
// final CLTParameters clt_parameters,
gpu_pair_img
,
// final float [][] fpixels, // to check for empty
gpu_width
,
// final int img_width,
woi
,
// Rectangle woi, // if null, use full GPU window
affines_gpu
,
// final double [][][] affine, // [2][2][3] affine coefficients to translate common to 2 images
tp_tasks
,
// TpTask [][] tp_tasks_o,
false
,
// final boolean batch_mode,
debugLevel
);
// final int debugLevel);
// may use tl_rect_metric to remap to the original image
double
[][]
tile_centers
=
new
double
[
vector_field
[
0
].
length
][];
int
tilesX
=
gpu_width
/
GPUTileProcessor
.
DTT_SIZE
;
for
(
TpTask
task:
tp_tasks
[
1
])
{
int
ti
=
task
.
getTileY
()
*
tilesX
+
task
.
getTileX
();
tile_centers
[
ti
]
=
task
.
getDoubleCenterXY
();
}
if
(
show_tile_centers
){
double
[][]
dbg_img
=
new
double
[
6
][
tile_centers
.
length
];
String
[]
dbg_titles
=
{
"cX"
,
"cY"
,
"px0"
,
"py0"
,
"px1"
,
"py1"
};
for
(
int
i
=
0
;
i
<
dbg_img
.
length
;
i
++)
Arrays
.
fill
(
dbg_img
[
i
],
Double
.
NaN
);
for
(
int
t
=
0
;
t
<
tp_tasks
[
0
].
length
;
t
++)
{
TpTask
task0
=
tp_tasks
[
0
][
t
];
TpTask
task1
=
tp_tasks
[
1
][
t
];
int
ti
=
task0
.
getTileY
()
*
tilesX
+
task0
.
getTileX
();
dbg_img
[
0
][
ti
]
=
task0
.
getDoubleCenterXY
()[
0
];
// same for task0, task1
dbg_img
[
1
][
ti
]
=
task1
.
getDoubleCenterXY
()[
1
];
dbg_img
[
2
][
ti
]
=
task0
.
getXY
()[
0
][
0
];
dbg_img
[
3
][
ti
]
=
task0
.
getXY
()[
0
][
1
];
dbg_img
[
4
][
ti
]
=
task1
.
getXY
()[
0
][
0
];
dbg_img
[
5
][
ti
]
=
task1
.
getXY
()[
0
][
1
];
}
// getXY()
ShowDoubleFloatArrays
.
showArrays
(
dbg_img
,
tilesX
,
tile_centers
.
length
/
tilesX
,
true
,
"tile_centers"
,
dbg_titles
);
}
OrthoPairLMA
orthoPairLMA
=
new
OrthoPairLMA
();
// vector_field[1] - neighbors
double
lambda
=
0.1
;
double
lambda_scale_good
=
0.5
;
double
lambda_scale_bad
=
8.0
;
double
lambda_max
=
100
;
double
rms_diff
=
0.001
;
int
num_iter
=
20
;
boolean
last_run
=
false
;
orthoPairLMA
.
prepareLMA
(
// will always calculate relative affine, starting with unity
tilesX
,
// int width,
vector_field
[
1
],
// double [][] vector_XYS, // optical flow X,Y, confidence obtained from the correlate2DIterate()
tile_centers
,
// double [][] centers, // tile centers (in pixels)
null
,
// double [] weights_extra, // optional, may be null
true
,
// boolean first_run,
debugLevel
);
// final int debug_level)
int
lma_rslt
=
orthoPairLMA
.
runLma
(
// <0 - failed, >=0 iteration number (1 - immediately)
lambda
,
// double lambda, // 0.1
lambda_scale_good
,
// double lambda_scale_good,// 0.5
lambda_scale_bad
,
// double lambda_scale_bad, // 8.0
lambda_max
,
// double lambda_max, // 100
rms_diff
,
// double rms_diff, // 0.001
num_iter
,
// int num_iter, // 20
last_run
,
// boolean last_run,
debugLevel
);
// int debug_level)
if
(
debugLevel
>
-
1
)
{
System
.
out
.
println
(
"LMA result = "
+
lma_rslt
);
}
if
(
lma_rslt
<
0
)
{
System
.
out
.
println
(
"LMA failed, result="
+
lma_rslt
);
return
null
;
}
double
rms
=
orthoPairLMA
.
getRms
();
if
(
rms
>
prev_rms
)
{
if
(
debugLevel
>
-
3
)
{
System
.
out
.
println
(
"LMA RMSE worsened: new"
+
rms
+
" ("
+
orthoPairLMA
.
getInitialRms
()+
"), prev="
+
prev_rms
);
}
break
;
}
affines_gpu
[
1
]=
OrthoMap
.
combineAffine
(
affines_gpu
[
1
],
orthoPairLMA
.
getAffine
());
double
[][]
jtj
=
orthoPairLMA
.
getLastJtJ
();
if
((
prev_rms
-
rms
)/
prev_rms
<
rel_improve
)
{
if
(
debugLevel
>
-
2
)
{
System
.
out
.
println
(
"LMA relative RMSE improvement = "
+((
prev_rms
-
rms
)/
prev_rms
)+
" < "
+
rel_improve
+
", exiting."
);
}
break
;
}
prev_rms
=
rms
;
}
// for (int ntry = 0; ntry < num_tries; ntry++) {
OrthoPairLMA
orthoPairLMA
=
new
OrthoPairLMA
();
// vector_field[1] - neighbors
double
lambda
=
0.1
;
double
lambda_scale_good
=
0.5
;
double
lambda_scale_bad
=
8.0
;
double
lambda_max
=
100
;
double
rms_diff
=
0.001
;
int
num_iter
=
20
;
boolean
last_run
=
false
;
orthoPairLMA
.
prepareLMA
(
// will always calculate relative affine, starting with unity
tilesX
,
// int width,
vector_field
[
1
],
// double [][] vector_XYS, // optical flow X,Y, confidence obtained from the correlate2DIterate()
tile_centers
,
// double [][] centers, // tile centers (in pixels)
null
,
// double [] weights_extra, // optional, may be null
true
,
// boolean first_run,
debugLevel
);
// final int debug_level)
int
lma_rslt
=
orthoPairLMA
.
runLma
(
// <0 - failed, >=0 iteration number (1 - immediately)
lambda
,
// double lambda, // 0.1
lambda_scale_good
,
// double lambda_scale_good,// 0.5
lambda_scale_bad
,
// double lambda_scale_bad, // 8.0
lambda_max
,
// double lambda_max, // 100
rms_diff
,
// double rms_diff, // 0.001
num_iter
,
// int num_iter, // 20
last_run
,
// boolean last_run,
debugLevel
);
// int debug_level)
System
.
out
.
println
(
"LMA result = "
+
lma_rslt
);
// analyze result, re-run correlation
/*
...
...
@@ -637,7 +666,7 @@ public class OrthoMapsCollection implements Serializable{
}
*/
if
(
debugLevel
>
1
)
{
if
(
debugLevel
>
1
)
{
// show result here
String
[]
map_names
=
{
ortho_maps
[
gpu_pair
[
0
]].
getName
(),
ortho_maps
[
gpu_pair
[
1
]].
getName
()};
ShowDoubleFloatArrays
.
showArrays
(
gpu_pair_img
,
...
...
src/main/java/com/elphel/imagej/orthomosaic/OrthoPairLMA.java
View file @
b3e9f364
...
...
@@ -99,6 +99,30 @@ public class OrthoPairLMA {
}
public
double
[][]
getAffine
(){
return
new
double
[][]
{
{
parameters_vector
[
0
],
parameters_vector
[
1
],
parameters_vector
[
4
]},
{
parameters_vector
[
2
],
parameters_vector
[
3
],
parameters_vector
[
5
]}};
}
public
double
getRms
()
{
return
last_rms
[
0
];
}
public
double
getInitialRms
()
{
return
initial_rms
[
0
];
}
public
double
getWeight
()
{
return
weight
;
}
public
double
[][]
getLastJtJ
(){
return
getWJtJlambda
(
0.0
,
// lambda, // *10, // temporary
this
.
last_jt
);
}
//getWJtJlambda(
// lambda, // *10, // temporary
// this.last_jt)
private
void
setSamplesWeightsYCenters
(
final
double
[][]
vector_XYS
,
final
double
[]
weights_extra
,
// null or additional weights (such as elevation-based)
...
...
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