Fixed races in IMS-related code, debugged fresh start of multi-sequence

processing

src/main/java/com/elphel/imagej/cameras/EyesisCorrectionParameters.java

@@ -227,7 +227,7 @@ public class EyesisCorrectionParameters {
     	public String linkedCenters="";  // linked models with centers scene in CUAS mode
     	public String x3dDirectory="";
     	public String videoDirectory=""; // combined (with MPEG) from multiple scene sequences video files
-    	public String cuasSeed ="";
+///    	public String cuasSeed ="";
 
     	public String mlDirectory="ml";
 
@@ -349,7 +349,7 @@ public class EyesisCorrectionParameters {
   			cp.swapSubchannels01=    	this.swapSubchannels01;
   			cp.linkedModels=    		this.linkedModels;
   			cp.linkedCenters=    		this.linkedCenters;
-  			cp.cuasSeed=    	    	this.cuasSeed;
+///  			cp.cuasSeed=    	    	this.cuasSeed;
   			cp.videoDirectory=    		this.videoDirectory;
   			cp.x3dDirectory=    		this.x3dDirectory;
   			cp.mlDirectory=    	     	this.mlDirectory;
@@ -570,7 +570,7 @@ public class EyesisCorrectionParameters {
 
     		properties.setProperty(prefix+"linkedModels",          this.linkedModels);
     		properties.setProperty(prefix+"linkedCenters",         this.linkedCenters);
-    		properties.setProperty(prefix+"cuasSeed",              this.cuasSeed);
+///    		properties.setProperty(prefix+"cuasSeed",              this.cuasSeed);
     		properties.setProperty(prefix+"videoDirectory",        this.videoDirectory);
     		properties.setProperty(prefix+"x3dDirectory",          this.x3dDirectory);
     		properties.setProperty(prefix+"use_x3d_subdirs",       this.use_x3d_subdirs+"");
@@ -773,7 +773,7 @@ public class EyesisCorrectionParameters {
 
 			if (properties.getProperty(prefix+"linkedModels")!=         null) this.linkedModels=properties.getProperty(prefix+"linkedModels");
 			if (properties.getProperty(prefix+"linkedCenters")!=        null) this.linkedCenters=properties.getProperty(prefix+"linkedCenters");
-			if (properties.getProperty(prefix+"cuasSeed")!=             null) this.cuasSeed=properties.getProperty(prefix+"cuasSeed");
+///			if (properties.getProperty(prefix+"cuasSeed")!=             null) this.cuasSeed=properties.getProperty(prefix+"cuasSeed");
 			if (properties.getProperty(prefix+"videoDirectory")!=       null) this.videoDirectory=properties.getProperty(prefix+"videoDirectory");
 			if (properties.getProperty(prefix+"x3dDirectory")!=         null) this.x3dDirectory=properties.getProperty(prefix+"x3dDirectory");
 
@@ -1665,7 +1665,10 @@ public class EyesisCorrectionParameters {
             for (String line:lines){
                 if (line.split("#").length > 0) {
                 String[] tokens = line.split("#")[0].trim().split("[\\s,;=]+");
-                if ((tokens.length > 2) && (tokens[0].toUpperCase().equals("SET"))) {
+                if ((tokens.length >= 2) && (tokens[0].toUpperCase().equals("SET"))) {
+                    if (tokens.length == 2) {
+                    	tokens = new String[] {tokens[0], tokens[1], ""};
+                    }
                 	parse_set:
                 	{
                 		for (String dir_name:KEY_DIRS) if (dir_name.equals(tokens[1])) {
@@ -1700,43 +1703,50 @@ public class EyesisCorrectionParameters {
 			if (!source_dir.exists()) {
 				source_dir.mkdirs();
 			}
-            if (dir_map.containsKey("cuasSeed")) {
-            	this.cuasSeed=(base_path.resolve(Paths.get(dir_map.get("cuasSeed")))).toString();
-            }
-			
+///         if (dir_map.containsKey("cuasSeed")) {
+///          	this.cuasSeed=(base_path.resolve(Paths.get(dir_map.get("cuasSeed")))).toString();
+///         }
 			
+            useCuasSeedDir = false;
             // Set other directories (possibly relative to base_path)
             for (int i = 2; i < KEY_DIRS.length; i++) { // skip "rootDirectory" and "sourceDirectory"
             	if (dir_map.containsKey(KEY_DIRS[i])) {
-            		Path dir_path=base_path.resolve(Paths.get(dir_map.get(KEY_DIRS[i])));
-            		File dir_file = new File(dir_path.toString());
-            		if (!dir_file.exists()) {
-            			dir_file.mkdirs();
+//            		Path dir_path=null;
+//            		File dir_file = null;
+            		String dir_string = "";
+            		if (dir_map.get(KEY_DIRS[i]).length() > 0){
+            			Path dir_path=base_path.resolve(Paths.get(dir_map.get(KEY_DIRS[i])));
+            			File dir_file = new File(dir_path.toString());
+            			if (!dir_file.exists()) {
+            				dir_file.mkdirs();
+            			}
+            			dir_string =  dir_path.toString();
             		}
             		switch (i) {
             		case 2: 
-            			this.linkedModels =     dir_path.toString();
+            			this.linkedModels =     dir_string; // dir_path.toString();
             			System.out.println("this.linkedModels="+this.linkedModels);
             			break;
             		case 3: 
-            			this.linkedCenters =     dir_path.toString();
+            			this.linkedCenters =    dir_string; //  dir_path.toString();
             			System.out.println("this.linkedCenters="+this.linkedCenters);
             			break;
             		case 4: 
-            			this.videoDirectory =   dir_path.toString();
+            			this.videoDirectory =   dir_string; // dir_path.toString();
             			System.out.println("this.videoDirectory="+this.videoDirectory);
             			break;
             		case 5: 
-            			this.x3dDirectory =     dir_path.toString();
+            			this.x3dDirectory =     dir_string; // dir_path.toString();
             			System.out.println("this.x3dDirectory="+this.x3dDirectory);
             			break;
             		case 6: 
-            			this.resultsDirectory = dir_path.toString();
+            			this.resultsDirectory = dir_string; // dir_path.toString();
             			System.out.println("this.resultsDirectory="+this.resultsDirectory);
             			break;
-            		case 7: 
-            			this.resultsDirectory = dir_path.toString();
-            			System.out.println("this.cuasSeed="+this.cuasSeed);
+            		case 7:  // cuasSeed
+            			this.cuasSeedDir =     dir_string; // dir_path.toString();
+            			System.out.println("this.cuasSeedDir=" + this.cuasSeedDir);
+            			useCuasSeedDir =   true;
             			break;
             		}
             	}
@@ -2363,14 +2373,17 @@ public class EyesisCorrectionParameters {
     		return this.imsRootDirectory + Prefs.getFileSeparator() + this.imsPrintSubdirectory;
      	}
     	
-
+    	/**
+    	 * Get directory with the CUAS seed (from previous sequences)
+    	 * @return : null if this.useCuasSeedDir==false (disabled), "" if empty, or absolute path ending with "/"
+    	 */
     	public String getCuasDir() {
-    		if ((this.cuasSeedDir == null) || (this.cuasSeedDir.length() == 0)|| !this.useCuasSeedDir) {
+    		if ((this.cuasSeedDir == null) || !this.useCuasSeedDir) {
     			return null;
     		}
-//			while (this.cuasSeedDir.startsWith(Prefs.getFileSeparator())) {
-//				this.cuasSeedDir=this.cuasSeedDir.substring(1);
-//			}
+    		if (this.cuasSeedDir.length() == 0) {
+    			return "";
+    		}
 			while (this.cuasSeedDir.endsWith(Prefs.getFileSeparator())) {
 				this.cuasSeedDir=this.cuasSeedDir.substring(0, this.cuasSeedDir.length()-1);
 			}

src/main/java/com/elphel/imagej/correction/Eyesis_Correction.java

@@ -442,7 +442,7 @@ public class Eyesis_Correction implements PlugIn, ActionListener {
 	public static EyesisCorrections EYESIS_CORRECTIONS = null;
 	public static EyesisCorrections EYESIS_CORRECTIONS_AUX = null;
 	public static EyesisCorrectionParameters.EquirectangularParameters EQUIRECTANGULAR_PARAMETERS = new EyesisCorrectionParameters.EquirectangularParameters();
-	public static EventLogger EVENT_LOGGER = null;
+///	public static EventLogger EVENT_LOGGER = null;
 
 	public static int CONVOLVE_FFT_SIZE = 128; // FFT size for sliding convolution with kernel
 	public static int THREADS_MAX = 100; // testing multi-threading, limit maximal number of threads
@@ -5686,6 +5686,24 @@ public class Eyesis_Correction implements PlugIn, ActionListener {
 			CLT_PARAMETERS.batch_run = true;
 			String imx_logs = CORRECTION_PARAMETERS.getImsSourceDirectory(); // sourceImsDirectory;
 			String debug_path = null; // CORRECTION_PARAMETERS.getImsPrintDirectory()+Prefs.getFileSeparator()+"debug_local_master";
+			if ((imx_logs == null) || imx_logs.equals("")) {
+				System.out.println("sourceImsDirectory is not set. Use Setup CLT Batch parameters to define it.");
+				return;
+			}
+			EventLogger eventLogger = EventLogger.getEventLogger(
+					imx_logs,
+					debug_path);
+			if (eventLogger == null) {
+				System.out.println("Failed to create eventLogger instance.");
+				return;
+			}
+			eventLogger.print2Pps(CORRECTION_PARAMETERS.getImsPrintDirectory()+Prefs.getFileSeparator()+"rec_1pps");
+			eventLogger.printStrobeInTime(CORRECTION_PARAMETERS.getImsPrintDirectory()+Prefs.getFileSeparator()+"did_strobe_in_time");
+			eventLogger.printPimu(CORRECTION_PARAMETERS.getImsPrintDirectory()+Prefs.getFileSeparator()+"did_pimu");
+			eventLogger.printGps(CORRECTION_PARAMETERS.getImsPrintDirectory()+Prefs.getFileSeparator()+"did_gps", 7);
+			eventLogger.printDidIns1(CORRECTION_PARAMETERS.getImsPrintDirectory()+Prefs.getFileSeparator()+"did_ins1");
+			eventLogger.printDidIns2(CORRECTION_PARAMETERS.getImsPrintDirectory()+Prefs.getFileSeparator()+"did_ins2");
+ /*
 			if (EVENT_LOGGER == null) {
 				if ((imx_logs != null) && !imx_logs.equals("")) {
 					EVENT_LOGGER = new EventLogger (
@@ -5706,6 +5724,7 @@ public class Eyesis_Correction implements PlugIn, ActionListener {
 			} else {
 				System.out.println("EVENT_LOGGEER is null.");
 			}
+*/			
 			return;
 //JTabbedTest
 // End of buttons code
@@ -8459,6 +8478,7 @@ public class Eyesis_Correction implements PlugIn, ActionListener {
 					null, // String set_name
 					QUAD_CLT, // QuadCLT quadCLT_main,
 					QUAD_CLT_AUX, // QuadCLT quadCLT_aux,
+					null, // QuadCLT quadCLT_this,
 					CLT_PARAMETERS, // EyesisCorrectionParameters.DCTParameters dct_parameters,
 					true, // boolean                                  skip_existing,
 					true, // boolean                                  search_KML,

src/main/java/com/elphel/imagej/cuas/CuasData.java

@@ -320,18 +320,22 @@ public class CuasData implements Serializable {
 									indx_best = i;
 								}
 							}
-							CuasTile tile = tile_list.get(indx_best).clone();
-							if ((num_vars > 1) && !single_variant){
-								for (int i = 0; i < num_vars; i++) if ((i != indx_best) && !tile_list.get(i).isEmpty()) {
-									if (all_variants || (tile_list.get(indx_best).diffTile2(tile_list.get(i)) <= tolerance2)) {
-										tile.merge(tile_list.get(i),decay);
-									}									
+							if (tile_list.get(indx_best).clt_data != null) {
+								CuasTile tile = tile_list.get(indx_best).clone();
+								if ((num_vars > 1) && !single_variant){
+									for (int i = 0; i < num_vars; i++) if ((i != indx_best) && !tile_list.get(i).isEmpty()) {
+										if (all_variants || (tile_list.get(indx_best).diffTile2(tile_list.get(i)) <= tolerance2)) {
+											tile.merge(tile_list.get(i),decay);
+										}									
+									}
 								}
+								tile.getData (
+										fclt,   // float [] fclt
+										nTile); // int      ntile)
+								fclt_weights[nTile] = (float) tile.getWeight(decay, ts_now);
+							} else {
+								System.out.println("collapse(): tile_list.get("+indx_best+")==null, num_vars= "+num_vars+", nTile="+nTile+", dts="+tile_list.get(indx_best).dts+", weight="+tile_list.get(indx_best).weight);
 							}
-							tile.getData (
-									fclt,   // float [] fclt
-									nTile); // int      ntile)
-							fclt_weights[nTile] = (float) tile.getWeight(decay, ts_now);
 						}
 					}
 				}

src/main/java/com/elphel/imagej/cuas/CuasTile.java

@@ -96,7 +96,8 @@ public class CuasTile implements  Comparable<CuasTile>, Serializable {
 	
 	public CuasTile cloneEmpty() {
 		int num_colors = clt_data.length/CLT_TILE_LENGTH;
-		return new CuasTile(num_colors, dts, 0, null);
+//		return new CuasTile(num_colors, dts, 0, null);
+		return new CuasTile(num_colors, dts, 0, new float[clt_data.length]);
 	}
 	
 	public double merge (CuasTile tile, double decay) {

src/main/java/com/elphel/imagej/gpu/GpuQuad.java

@@ -1289,7 +1289,7 @@ public class GpuQuad{ // quad camera description
 		if (!force && this.gpuTileProcessor.bayer_set && !quadCLT.hasNewImageData()) {
 			return;
 		}
-		double [][] bayer_center = quadCLT.getImageCenter(); 
+		double [][] bayer_center = quadCLT.getImageCenter(); // null
 		//		if (bayer_center != null) {
 		if (center) {		
 			quadCLT.getResetImageCenter();

src/main/java/com/elphel/imagej/ims/EventLogger.java

@@ -14,7 +14,24 @@ import ij.Prefs;
 
 public class EventLogger {
 	public  EventLoggerFileInfo [] logger_files;
-	public EventLogger (String dir, String debug_prefix) { // dir should contain only event logger files
+	private static EventLogger eventLogger = null;
+//	public static synchronized boolean hasEventLogger() { // 
+//		return eventLogger != null;
+//	}
+	public static synchronized EventLogger getEventLogger() {
+		return eventLogger;
+	}
+	
+	public static synchronized EventLogger getEventLogger(
+			String dir,
+			String debug_prefix) {
+		if (eventLogger == null) {
+			eventLogger = new EventLogger (dir, debug_prefix);
+			System.out.println("Created eventLogger");
+		}
+		return eventLogger;
+	}
+	private EventLogger (String dir, String debug_prefix) { // dir should contain only event logger files
 		if (!dir.endsWith(Prefs.getFileSeparator())) {
 			dir+=Prefs.getFileSeparator();
 		}
@@ -34,10 +51,6 @@ public class EventLogger {
 			}
 		}
 		Arrays.sort(logger_files); // increasing start time stamps
-		
-//		testInterpolateDidIns1();
-//		testInterpolateDidIns1();
-//		testInterpolateDidIns1();
 		System.out.println("Processed "+logger_files.length+" event log files");
 	}
 	

src/main/java/com/elphel/imagej/tileprocessor/Interscene.java

@@ -1019,6 +1019,15 @@ public class Interscene {
 					quat_corr, // double []  quat_corr, // only applies to rotations - verify!
 					debugLevel) ; // int        debugLevel)
 		}
+		boolean debug_ims_xyzatr = true;
+		if (debug_ims_xyzatr) {
+			System.out.println("lock_position(set x,y,z = 0)="+lock_position);
+			System.out.println(String.format("%6s, %20s, %15s, %15s, %15s, %15s, %15s, %15s", "index","timestamp", "X", "Y", "Z", "Azimuth", "Tilt", "Roll"));
+			for (int i = 0; i < quadCLTs.length; i++) {
+				System.out.println(String.format("%6d, %20s, %15.12f, %15.12f, %15.12f, %15.12f, %15.12f, %15.12f", i,quadCLTs[i].getImageName(),
+						ims_xyzatr[i][0][0],ims_xyzatr[i][0][1],ims_xyzatr[i][0][2],ims_xyzatr[i][1][0],ims_xyzatr[i][1][1],ims_xyzatr[i][1][2]));
+			}
+		}
 		if (lock_position) { // zero linear offsets
 			for (int i = 0; i < quadCLTs.length; i++) for (int j = 0; j < 3; j++){
 				ims_xyzatr[i][0][j]=0.0;

src/main/java/com/elphel/imagej/tileprocessor/QuadCLT.java

@@ -167,13 +167,17 @@ public class QuadCLT extends QuadCLTCPU {
 		}
 		return imp_virtual;
 	}
-
+    /**
+     * Convert centerCLT image from transform domain
+     * @param fclt float transform-domain image representation. First index - sensor
+     * @return
+     */
 	public double [][] convertCenterClt(
 			float [][] fclt){ // may be null 
-		if (getCenterClt() == null) {
-			System.out.println("convertCenterClt(): not a center CLT");
-			return null;
-		}
+//		if (getCenterClt() == null) {
+//			System.out.println("convertCenterClt(): not a center CLT");
+//			return null;
+//		}
 		int sensor_mask_clt = 1; // just one
 		setQuadClt();
 		int tilesX = getTilesX();
@@ -1985,7 +1989,7 @@ public class QuadCLT extends QuadCLTCPU {
 								}
 							}
 							if (has_inv) { // if there is at least one (significant) inversion - keep only longest
-								for (int i = max_len_indx +1; i < tilesX; i++) {
+								for (int i = max_len_indx +1; i < tilesY; i++) {
 									pXpYD[nTileX + i * tilesX] = null;
 								}
 								int start_i = max_len_indx - num_mono[max_len_indx];

src/main/java/com/elphel/imagej/tileprocessor/TexturedModel.java

@@ -3848,7 +3848,7 @@ public class TexturedModel {
 			System.out.println("**** output3d(): likely a bug (not copied?), temporary fix ***");
 			correctionsParameters.use_set_dirs = true; 
 		}
-		ref_scene.writeKml        (null, debugLevel);
+		ref_scene.writeKml        (debugLevel);
 ///		ref_scene.writeRatingFile (debugLevel); broke
 		Runtime.getRuntime().gc();
 		System.out.println("output3d(): generating 3d output files  finished at "+

src/main/java/com/elphel/imagej/tileprocessor/TwoQuadCLT.java

@@ -2990,7 +2990,7 @@ if (debugLevel > -100) return true; // temporarily !
 		return texture_tiles;
 
 	}
-
+	
 	public static void copyJP4src(
 			final SetChannels []                     set_channels,
 			final int []                             range, // [earlies, latest]
@@ -3011,6 +3011,7 @@ if (debugLevel > -100) return true; // temporarily !
 								set_channels[nScene].set_name, // String set_name
 								quadCLT_main,                  // QuadCLT quadCLT_main,
 								null,                          // QuadCLT quadCLT_aux,
+								null,                          // QuadCLT quadCLT_this, // Does not setup IMS !!!
 								clt_parameters,                // EyesisCorrectionParameters.DCTParameters dct_parameters,
 								true,                          // boolean                                  skip_existing,					
 								true,                          // boolean                                  search_KML,
@@ -3020,8 +3021,6 @@ if (debugLevel > -100) return true; // temporarily !
 	        };
 	    }		      
 	    ImageDtt.startAndJoin(threads);
-
-		
 	}
 	
 
@@ -3030,6 +3029,7 @@ if (debugLevel > -100) return true; // temporarily !
 	 * @param set_name       set name (timestamp)
 	 * @param quadCLT_main   RGB QuadCLT instance
 	 * @param quadCLT_aux    secondary RGB or LWIR QuadCLT instance
+	 * @param quadCLT_ims    only used for IMS
 	 * @param clt_parameters CLT parameters
 	 * @param skip_existing  do not copy if destination files exist
 	 * @param search_KML     search for geo data and extract it to KML file if found
@@ -3039,6 +3039,7 @@ if (debugLevel > -100) return true; // temporarily !
 			String                                   set_name,
 			QuadCLT                                  quadCLT_main,  // tiles should be set
 			QuadCLT                                  quadCLT_aux,
+			QuadCLT                                  quadCLT_this,
 			CLTParameters clt_parameters,
 			boolean                                  skip_existing,
 			boolean                                  search_KML,
@@ -3077,9 +3078,6 @@ if (debugLevel > -100) return true; // temporarily !
 				path_list.add(sourceFiles_main[fn]);
 			}
 		}
-//		if (set_channels_main !=null) {
-//			quadCLT_main.writeKml(debugLevel ); // also generated with x3d model
-//		}
 
 		String jp4_copy_path= quadCLT_main.correctionsParameters.selectX3dDirectory(
 				set_name, // quad timestamp. Will be ignored if correctionsParameters.use_x3d_subdirs is false
@@ -3096,25 +3094,24 @@ if (debugLevel > -100) return true; // temporarily !
 				already_copied = true;
 			}
 		}
-		
-		if (clt_parameters.imp.ims_use) {
-			String ims_path = dir.getParent() + Prefs.getFileSeparator()+set_name+quadCLT_main.correctionsParameters.imsSuffix;
-			double [] saved_offset =  quadCLT_main.readImsOffset(
-					ims_path, // String ims_path,
-					debugLevel); // int debugLevel)
-			if ((saved_offset == null) || (saved_offset[0] != clt_parameters.imp.ims_offset) || (saved_offset[1] != clt_parameters.imp.gmt_plus)) {
-				quadCLT_main.saveIms(
-						clt_parameters.imp.ims_offset,
-						clt_parameters.imp.gmt_plus,   //  double gmt_plus,
-						ims_path,
-						debugLevel);
-			}
+		// not needed, restoreNoModel() and restoreFromModel call restoreIMS
+		/*
+		if (clt_parameters.imp.ims_use && (quadCLT_this != null)) {
+			quadCLT_this.setupIMS(
+					clt_parameters, // CLTParameters clt_parameters,
+					skip_existing,  // boolean skip_existing,
+					 debugLevel);   // int     debugLevel);
 		}
-		
+		*/
 		if (search_KML && (set_channels_main !=null)) { // TODO: make it look in both MAIN and AUX. Look in only the same scene?
-			quadCLT_main.writeKml(
-					set_name,
-					debugLevel ); // also generated with x3d model
+			if (quadCLT_this != null) {
+				quadCLT_main.writeKml(
+						debugLevel ); // also generated with x3d model
+			} else {
+				quadCLT_main.writeKml(
+						set_name,
+						debugLevel ); // also generated with x3d model
+			}
 		}
 		if (already_copied) {
 			if (debugLevel >= min_dbg) System.out.println("Skipping existing directory "+dir);
@@ -8086,6 +8083,7 @@ if (debugLevel > -100) return true; // temporarily !
 						null,           // String                                   set_name
 						quadCLT_main,   // QuadCLT                                  quadCLT_main,  // tiles should be set
 						quadCLT_aux,    // QuadCLT                                  quadCLT_aux,
+						null,           // QuadCLT quadCLT_this,
 						clt_parameters, // EyesisCorrectionParameters.CLTParameters clt_parameters,
 						true, // boolean                                  skip_existing,
 						true, // boolean                                  search_KML,
@@ -8597,14 +8595,16 @@ if (debugLevel > -100) return true; // temporarily !
 		
 		EyesisCorrectionParameters.CorrectionParameters.PathFirstLast[] pathFirstLast = null;
 		int num_seq = 1;
+		clt_parameters.batch_run = false;// 07.08.2025
 		if (quadCLT_main.correctionsParameters.useSourceList) {
-	    	System.out.println("\nReading source list from file: "+quadCLT_main.correctionsParameters.sourceSequencesList);
+			System.out.println("\nReading source list from file: "+quadCLT_main.correctionsParameters.sourceSequencesList);
 			pathFirstLast = quadCLT_main.correctionsParameters.getSourceSets(
 					quadCLT_main.correctionsParameters.sourceSequencesList);
 			if (pathFirstLast != null) {
 				num_seq = pathFirstLast.length; 
 			}
 			clt_parameters.multiseq_run = true; // running from the source list - disable debug images
+			clt_parameters.batch_run =    true; // 07.08.2025
 		}
 		
 		class VideoSet {
@@ -8629,11 +8629,19 @@ if (debugLevel > -100) return true; // temporarily !
 		ArrayList<VideoSet> video_sets_list = new ArrayList<VideoSet>();
 		
 		String [] cuas_centers = null; // [0] - cumulative input, [1] - cumulative output
+		if (quadCLT_main.correctionsParameters.useCuasSeedDir) {
+			cuas_centers = new String [] {quadCLT_main.correctionsParameters.cuasSeedDir,""};
+		}
+		if (debugLevel > -4) {
+			System.out.println("cuas_centers="+((cuas_centers != null)?("[\""+cuas_centers[0]+"\",\""+cuas_centers[1]+"\"]"):"null"));
+		}
+		/*
 		if ((quadCLT_main.correctionsParameters.cuasSeed != null) && (quadCLT_main.correctionsParameters.cuasSeed.length()>0)) {
 			cuas_centers = new String [] {quadCLT_main.correctionsParameters.cuasSeed,""};
 		} else if (quadCLT_main.correctionsParameters.getCuasDir() != null) {
 			cuas_centers = new String [] {quadCLT_main.correctionsParameters.getCuasDir(),""};
 		}
+		*/
 		for (int nseq = 0; nseq < num_seq; nseq++) {
 	    	long start_time_seq = System.nanoTime();
 	    	System.out.println("\nSTARTED PROCESSING SCENE SEQUENCE "+nseq+" (last is "+(num_seq-1)+")\n");
@@ -12181,6 +12189,7 @@ if (debugLevel > -100) return true; // temporarily !
 									set_name,       // String                                   set_name
 									quadCLT_main,   // QuadCLT                                  quadCLT_main,  // tiles should be set
 									quadCLT_aux,    // QuadCLT                                  quadCLT_aux,
+									null, // QuadCLT quadCLT_this,
 									clt_parameters, // EyesisCorrectionParameters.CLTParameters clt_parameters,
 									true, // boolean                                  skip_existing,
 									true, // boolean                                  search_KML,
@@ -12314,6 +12323,7 @@ if (debugLevel > -100) return true; // temporarily !
 											set_name,           // String                                   set_name
 											quadCLT_main,   // QuadCLT                                  quadCLT_main,  // tiles should be set
 											quadCLT_aux,    // QuadCLT                                  quadCLT_aux,
+											null, // QuadCLT quadCLT_this,
 											clt_parameters, // EyesisCorrectionParameters.CLTParameters clt_parameters,
 											true, // boolean                                  skip_existing,
 											true, // boolean                                  search_KML,
@@ -12623,6 +12633,7 @@ if (debugLevel > -100) return true; // temporarily !
 									set_name,           // String                                   set_name
 									quadCLT_main,   // QuadCLT                                  quadCLT_main,  // tiles should be set
 									quadCLT_aux,    // QuadCLT                                  quadCLT_aux,
+									null, // QuadCLT quadCLT_this,
 									clt_parameters, // EyesisCorrectionParameters.CLTParameters clt_parameters,
 									true, // boolean                                  skip_existing,
 									true, // boolean                                  search_KML,

src/main/java/com/elphel/imagej/tileprocessor/lwoc/LwirWorld.java

@@ -328,6 +328,7 @@ public class LwirWorld {
 						set_channels[ref_index].set_name, // String set_name
 						quadCLT_main, // QuadCLT quadCLT_main,
 						null, // QuadCLT quadCLT_aux,
+						null, // QuadCLT quadCLT_this,
 						clt_parameters, // EyesisCorrectionParameters.DCTParameters dct_parameters,
 						true, // boolean                                  skip_existing,
 						true, // false, // boolean                                  search_KML,
@@ -520,6 +521,7 @@ public class LwirWorld {
 							set_channels[scene_index].set_name, // String set_name
 							quadCLT_main, // QuadCLT quadCLT_main,
 							null, // QuadCLT quadCLT_aux,
+							null, // QuadCLT quadCLT_this,
 							clt_parameters, // EyesisCorrectionParameters.DCTParameters dct_parameters,
 							true, // boolean                                  skip_existing,					
 							true, // false, // boolean                                  search_KML,