started sorting tiles between surfaces

src/main/java/EyesisCorrectionParameters.java

@@ -2212,7 +2212,8 @@ public class EyesisCorrectionParameters {
   		
   		public boolean    msUseSel             =   true; // Use planes selection masks (generated when splitting to intersecting pairs  
   		public boolean    msDivideByArea       =   true; // Divide plane strengths by ellipsoid area
-  		public double     msScaleProj          =   1.5;  // Scale projection of the plane ellkipsoid 
+  		public double     msScaleProj          =   1.5;  // Scale projection of the plane ellipsoid 
+  		public double     msFractUni           =   0.3;  // Spread this fraction of the ellipsoid weight among extended (double) supertile  
   		
   		public boolean    replaceWeakOutlayers =   true; // false; 
   		
@@ -2516,6 +2517,7 @@ public class EyesisCorrectionParameters {
 			properties.setProperty(prefix+"msUseSel",         this.msUseSel+"");
 			properties.setProperty(prefix+"msDivideByArea",   this.msDivideByArea+"");
 			properties.setProperty(prefix+"msScaleProj",      this.msScaleProj +"");
+			properties.setProperty(prefix+"msFractUni",       this.msFractUni +"");
   			
 			properties.setProperty(prefix+"dbg_migrate",            this.dbg_migrate+"");
   			
@@ -2812,6 +2814,7 @@ public class EyesisCorrectionParameters {
   			if (properties.getProperty(prefix+"msUseSel")!=null)          this.msUseSel=Boolean.parseBoolean(properties.getProperty(prefix+"msUseSel"));
   			if (properties.getProperty(prefix+"msDivideByArea")!=null)    this.msDivideByArea=Boolean.parseBoolean(properties.getProperty(prefix+"msDivideByArea"));
   			if (properties.getProperty(prefix+"msScaleProj")!=null)       this.msScaleProj=Double.parseDouble(properties.getProperty(prefix+"msScaleProj"));
+  			if (properties.getProperty(prefix+"msFractUni")!=null)        this.msFractUni=Double.parseDouble(properties.getProperty(prefix+"msFractUni"));
 
   			
   			if (properties.getProperty(prefix+"dbg_migrate")!=null)       this.dbg_migrate=Boolean.parseBoolean(properties.getProperty(prefix+"dbg_migrate"));
@@ -3134,6 +3137,7 @@ public class EyesisCorrectionParameters {
   			gd.addCheckbox    ("Use planes selection masks (generated when splitting to intersecting pairs",   this.msUseSel);
   			gd.addCheckbox    ("Divide plane strengths by ellipsoid area",                                     this.msDivideByArea);
   			gd.addNumericField("Scale projection of the plane ellipsoid",                                      this.msScaleProj,  6);
+  			gd.addNumericField("Spread this fraction of the ellipsoid weight among extended (double) supertile",this.msFractUni,  6);
   			
   			gd.addCheckbox    ("Test new mode after migration",                                                this.dbg_migrate);
 
@@ -3437,6 +3441,7 @@ public class EyesisCorrectionParameters {
   			this.msUseSel=              gd.getNextBoolean();
   			this.msDivideByArea=        gd.getNextBoolean();
   			this.msScaleProj=           gd.getNextNumber();
+  			this.msFractUni=            gd.getNextNumber();
   			
   			this.dbg_migrate=           gd.getNextBoolean();
 

src/main/java/MeasuredLayers.java

@@ -380,7 +380,7 @@ public class MeasuredLayers {
 	 * @param sel_in optional selection for this supertile (linescan, 4 * supetile size)
 	 * @param disp_far lowest acceptable disparity value. Double.NaN - do not check.
 	 * @param disp_near highest acceptable disparity value. Double.NaN - do not check.
-	 * @param null_if_none return null if there are no selected tiles in teh result selection
+	 * @param null_if_none return null if there are no selected tiles in the result selection
 	 * @return boolean array [4*superTileSize] of the selected tiles on the specified
 	 * measurement layer
 	 */
@@ -548,8 +548,9 @@ public class MeasuredLayers {
 	 * @param stX supertile horizontal position in the image
 	 * @param stY supertile vertical position in the image
 	 * @param sel_in optional selection for this supertile (linescan, 4 * supetile size)
-	 * @param null_if_none return null if there are no selected tiles in the result selection
+	 * @param strength_floor subtract from the correlation strength, limit by 0
 	 * @param strength_pow Non-linear treatment of correlation strength. Raise data to the strength_pow power
+	 * @param null_if_none return null if there are no selected tiles in the result selection
 	 * @return double [2][4*superTileSize] {disparity[4*superTileSize], strength [4*superTileSize]}
 	 */
 
@@ -598,6 +599,40 @@ public class MeasuredLayers {
 		return ds;
 	}
 
+	/**
+	 * Get disparity and correlation strength for the specific measurement layer.
+	 * Combined with input selection
+	 * @param num_layer number of the measurement layer to process
+	 * @param strength_floor subtract from the correlation strength, limit by 0
+	 * @param strength_pow Non-linear treatment of correlation strength. Raise data to the strength_pow power
+	 * @return double {disparity[tilesX * tilesY], strength[tilesX * tilesY]}
+	 */
+
+	public double[][] getDisparityStrength (
+			int num_layer,
+			double strength_floor,
+			double strength_pow)
+	{
+		if (layers[num_layer] == null){
+			return null;
+		}
+		double [][] ds = {getDisparity(num_layer),getStrength(num_layer)};
+		for (int i = 0; i < ds[1].length; i++){
+			double w = ds[1][i] - strength_floor;
+			if (w > 0) {
+				if (strength_pow != 1.0) w = Math.pow(w, strength_pow);
+				ds[1][i] = w;
+			} else {
+				ds[1][i] = 0.0;
+			}
+		}
+
+		return ds;
+	}
+	
+	
+	
+	
 	/**
 	 * Get double-size  (for overlapping) array of disparities and strengths for the supertile
 	 * Using best (producing lowest disparity variance) subset of neighbor tiles

src/main/java/SuperTiles.java

@@ -5981,5 +5981,29 @@ public class SuperTiles{
 		return snap_sort;
 	}
 
+	public double [][][] getDisparityStrengths(
+			int        stMeasSel) //            = 1;      // Select measurements for supertiles : +1 - combo, +2 - quad +4 - hor +8 - vert)
+	{
+		int numMeasLayers = measuredLayers.getNumLayers();
+		double [][][] ds = new double[numMeasLayers][][];
+		for (int ml = 0; ml <  numMeasLayers; ml++) if ((stMeasSel & ( 1 << ml)) != 0) {
+			ds[ml] = 	measuredLayers.getDisparityStrength (
+					ml, // int num_layer,
+					this.strength_floor, // double strength_floor,
+					this.strength_pow); //  double strength_pow)
+		}
+		return ds;
+	}
 
+	public boolean [][] getMeasurementSelections(
+			int        stMeasSel) //            = 1;      // Select measurements for supertiles : +1 - combo, +2 - quad +4 - hor +8 - vert)
+	{
+		int numMeasLayers = measuredLayers.getNumLayers();
+		boolean [][] sels = new boolean[numMeasLayers][];
+		for (int ml = 0; ml <  numMeasLayers; ml++) if ((stMeasSel & ( 1 << ml)) != 0) {
+			sels[ml] = 	measuredLayers.getSelection (ml);
+		}
+		return sels;
+	}
+	
 } // end of class SuperTiles

src/main/java/TilePlanes.java

@@ -1475,6 +1475,7 @@ public class TilePlanes {
 		 * @param use_sel use plane selection (this.sel_mask) to select only some part of the plane
 		 * @param divide_by_area divide weights by ellipsoid area
 		 * @param scale_projection use plane ellipsoid projection for weight: 0 - do not use, > 0 linearly scale ellipsoid 
+		 * @param fraction_uni add fraction of the total weight to each tile
 		 * @return a pair of arrays {disparity, strength}, each [2 * superTileSize * 2 * superTileSize], only 1/2 or 1/4 used for offset tiles\
 		 * TODO: add a combination of the ellipses and infinite planes?
 		 * 
@@ -1485,6 +1486,7 @@ public class TilePlanes {
 				boolean   use_sel,
 				boolean   divide_by_area,
 				double    scale_projection,
+				double    fraction_uni,
 				int       debugLevel)
 		{
 			double [][] disp_strength = new double[2][4*superTileSize*superTileSize];
@@ -1555,8 +1557,6 @@ public class TilePlanes {
 					int indx_i = iy * ss4 + ix; // input index
 					disp_strength[0][indx] = zxy[0] - (normal[1] * x + normal[2] * y)/normal[0];
 					double w = weight;
-					if (window != null) w *= window[indx_i];
-					if (use_sel && (sel_mask != null) && !(sel_mask[indx_i])) w = 0.0;
 					if ((w > 0.0) && (scale_projection > 0.0)){
 						double [] xy = {x,y};
 						Matrix vxy = vect2d.times(new Matrix(xy,2)); // verify if it is correct
@@ -1565,7 +1565,10 @@ public class TilePlanes {
 							double d = vxy.get(i,0);
 							r2 += d * d / val2d.get(i, i);
 						}
-						w *= Math.exp(-k_gauss*r2);
+						w *= ((1.0 - fraction_uni) * Math.exp(-k_gauss*r2) + fraction_uni);
+						
+						if (window != null) w *= window[indx_i];
+						if (use_sel && (sel_mask != null) && !(sel_mask[indx_i])) w = 0.0;
 					}					
 					disp_strength[1][indx] = w;
 				}