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imagej-elphel
Commit 673cd8a6 authored by Andrey Filippov's avatar Andrey Filippov
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more debugging

parent 50987d91
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Showing with 186 additions and 35 deletions
src/main/java/com/elphel/imagej/cuas/CuasMotionLMA.java
View file @ 673cd8a6
......@@ -69,21 +69,23 @@ public class CuasMotionLMA {
public static final int RSLT_MATCH_LENGTH= 27;
public static final int RSLT_BEFORE_LENGTH= 28; // just for debug
public static final int RSLT_AFTER_LENGTH= 29; // just for debug
public static final int RSLT_SEQ_TRAVEL= 30;
// [RSLT_MATCH_LENGTH] is one less than the total length (0 - isolated)
public static final int RSLT_MSCORE = 30;
public static final int RSLT_MSCORE = 31;
public static final int RSLT_QA = 31;
public static final int RSLT_QRMS = 32;
public static final int RSLT_QRMS_A = 33;
public static final int RSLT_QCENTER = 34;
public static final int RSLT_QMATCH = 35;
public static final int RSLT_QMATCH_LEN=36;
public static final int RSLT_QSCORE = 37;
public static final int RSLT_STRONGER =38; // index of stronger neighbor (may be more)
public static final int RSLT_SLOW = 39; // 1 - slow, 0 - fast
public static final int RSLT_WHEN = 40;
public static final int RSLT_FAIL = 41;
public static final int RSLT_QA = 32;
public static final int RSLT_QRMS = 33;
public static final int RSLT_QRMS_A = 34;
public static final int RSLT_QCENTER = 35;
public static final int RSLT_QMATCH = 36;
public static final int RSLT_QMATCH_LEN=37;
public static final int RSLT_QTRAVEL= 38;
public static final int RSLT_QSCORE = 39;
public static final int RSLT_STRONGER =40; // index of stronger neighbor (may be more)
public static final int RSLT_SLOW = 41; // 1 - slow, 0 - fast
public static final int RSLT_WHEN = 42;
public static final int RSLT_FAIL = 43;
public static final int RSLT_LEN = RSLT_FAIL+1;
......@@ -96,8 +98,9 @@ public class CuasMotionLMA {
"ERR-BEFORE", "ERR-AFTER", "BA-DIRS", // before dir + 16*after dir
"Match-length",
"Length-before","Length-after", // just for debug, may be removed later
"TRAVEL",
"*MOTION-SCORE",
"*Q-AMPL","*Q-RMSE","*Q-RMSE/A","*Q-CENTER","*Q-MATCH","*Q-LENGTH","*Q-SCORE",
"*Q-AMPL","*Q-RMSE","*Q-RMSE/A","*Q-CENTER","*Q-MATCH","*Q-LENGTH","*QTRAVEL","*Q-SCORE",
"Stronger","Slow",
"WHEN", "FAILURE"};
......
src/main/java/com/elphel/imagej/tileprocessor/IntersceneMatchParameters.java
View file @ 673cd8a6
......@@ -789,7 +789,7 @@ min_str_neib_fpn 0.35
public double cuas_score_lma = 0.0; // minimal score for the target LMA
public double cuas_factor_lim = 5.0; // limit each individual score factor
public double cuas_factor_pow = 1.0; // raise score factor to this power before combining
public double [] cuas_score_coeff = {1.0, 0.2, 1.0, 1.0, 1.0, 1.0}; //weights of amplitude, RMSE and RMSE/amplitude, center, mismatch, match_length
public double [] cuas_score_coeff = {1.0, 0.05, 0.7, 1.5, 2.0, 1.0, 1.0}; //weights of amplitude, RMSE and RMSE/amplitude, center, mismatch, match_length, travel
public boolean cuas_center_targ = true; // re-run target extraction with targets centered to their tiles
public boolean cuas_multi_targ = true; // Use multi-target for each tile mode
......@@ -805,6 +805,7 @@ min_str_neib_fpn 0.35
// public boolean cuas_remove_2seq_all=true; // Remove 2-long first/last target sequences
public double cuas_max_mismatch = 2.0; // maximal position error between consecutive scene sequences
public double cuas_good_mismatch = 0.4; // maximal position error between consecutive scene sequences that adds to the score
public double cuas_slow_fast_mismatch = 1.5; // allow larger mismatch between slow and fast
public double cuas_match_len_pwr = 0.5; // raise matching length to this power for calculating score
public boolean cuas_fail_mismatch = false; // fail high mismatch early
......@@ -2430,7 +2431,7 @@ min_str_neib_fpn 0.35
gd.addNumericField("Raise score factor to this power", this.cuas_factor_pow, 5,8,"",
"Raise each score factor to this power before combining them.");
gd.addStringField ("Score factors weights", IntersceneMatchParameters.doublesToString(cuas_score_coeff), 80,
"Relative importance of LMA amplitude, RMSE and RMSE/ampitude, center, before/after match, sqrt(match length).");
"Relative importance of LMA amplitude, RMSE and RMSE/ampitude, center, before/after match, sqrt(match length), travel.");
gd.addCheckbox ("Center targets in their tiles", this.cuas_center_targ,
"Re-run target extraction placing the targets at the center of their tiles.");
gd.addCheckbox ("Multi-target mode", this.cuas_multi_targ,
......@@ -2455,6 +2456,8 @@ min_str_neib_fpn 0.35
"Maximal position error between consecutive scene sequences.");
gd.addNumericField("Good mismatch", this.cuas_good_mismatch, 5,8,"pix",
"Maximal position error between consecutive scene sequences to add to the score.");
gd.addNumericField("Good mismatch between slow and fast", this.cuas_slow_fast_mismatch, 5,8,"pix",
"Allow larger mismatch between slow and fast.");
gd.addNumericField("Matching length power", this.cuas_match_len_pwr, 5,8,"",
"Raise matching length to this power for calculating score.");
......@@ -3604,6 +3607,7 @@ min_str_neib_fpn 0.35
this.cuas_max_mismatch= gd.getNextNumber();
this.cuas_good_mismatch = gd.getNextNumber();
this.cuas_slow_fast_mismatch = gd.getNextNumber();
this.cuas_match_len_pwr = gd.getNextNumber();
this.cuas_fail_mismatch = gd.getNextBoolean();
......@@ -4639,6 +4643,7 @@ min_str_neib_fpn 0.35
properties.setProperty(prefix+"cuas_max_mismatch", this.cuas_max_mismatch+""); // double
properties.setProperty(prefix+"cuas_good_mismatch", this.cuas_good_mismatch+""); // double
properties.setProperty(prefix+"cuas_slow_fast_mismatch",this.cuas_slow_fast_mismatch+"");// double
properties.setProperty(prefix+"cuas_match_len_pwr", this.cuas_match_len_pwr+""); // double
properties.setProperty(prefix+"cuas_fail_mismatch", this.cuas_fail_mismatch+""); // boolean
......@@ -5636,6 +5641,7 @@ min_str_neib_fpn 0.35
if (properties.getProperty(prefix+"cuas_min_seq_fl")!=null) this.cuas_min_seq_fl=Integer.parseInt(properties.getProperty(prefix+"cuas_min_seq_fl"));
if (properties.getProperty(prefix+"cuas_max_mismatch")!=null) this.cuas_max_mismatch=Double.parseDouble(properties.getProperty(prefix+"cuas_max_mismatch"));
if (properties.getProperty(prefix+"cuas_good_mismatch")!=null) this.cuas_good_mismatch=Double.parseDouble(properties.getProperty(prefix+"cuas_good_mismatch"));
if (properties.getProperty(prefix+"cuas_slow_fast_mismatch")!=null)this.cuas_slow_fast_mismatch=Double.parseDouble(properties.getProperty(prefix+"cuas_slow_fast_mismatch"));
if (properties.getProperty(prefix+"cuas_match_len_pwr")!=null) this.cuas_match_len_pwr=Double.parseDouble(properties.getProperty(prefix+"cuas_match_len_pwr"));
if (properties.getProperty(prefix+"cuas_fail_mismatch")!=null) this.cuas_fail_mismatch=Boolean.parseBoolean(properties.getProperty(prefix+"cuas_fail_mismatch"));
......@@ -6636,6 +6642,7 @@ min_str_neib_fpn 0.35
imp.cuas_max_mismatch = this.cuas_max_mismatch;
imp.cuas_good_mismatch = this.cuas_good_mismatch;
imp.cuas_slow_fast_mismatch = this.cuas_slow_fast_mismatch;
imp.cuas_match_len_pwr = this.cuas_match_len_pwr;
imp.cuas_fail_mismatch = this.cuas_fail_mismatch;
......
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