Fixed old bug in 4 images (October, 6, 2020), propagating non-quad

configurations

src/main/java/com/elphel/imagej/correction/Eyesis_Correction.java

@@ -63,8 +63,10 @@ import java.util.Arrays;
 import java.util.Collections;
 import java.util.Comparator;
 import java.util.EnumSet;
+import java.util.Iterator;
 import java.util.List;
 import java.util.Properties;
+import java.util.Set;
 import java.util.concurrent.atomic.AtomicInteger;
 
 import javax.swing.JFileChooser;
@@ -775,6 +777,7 @@ private Panel panel1,
 			addButton("Reset Geometry",             panelLWIR16, color_stop);
 			addButton("Reset AUX Geometry",         panelLWIR16, color_stop);
 			addButton("Generate Sym Vectors",       panelLWIR16, color_configure);
+			addButton("Image Properties",           panelLWIR16, color_conf_process);
 			plugInFrame.add(panelLWIR16);
 			
 		}
@@ -4338,7 +4341,7 @@ private Panel panel1,
 
 ///========================================
 
-        QUAD_CLT.processCLTQuads(
+        QUAD_CLT.processCLTQuads( // uses quad
         		CLT_PARAMETERS,  // EyesisCorrectionParameters.DCTParameters           dct_parameters,
         		DEBAYER_PARAMETERS, //EyesisCorrectionParameters.DebayerParameters     debayerParameters,
         		COLOR_PROC_PARAMETERS, //EyesisCorrectionParameters.ColorProcParameters colorProcParameters,
@@ -5355,6 +5358,68 @@ private Panel panel1,
     			full_type1, // boolean full_type1,  // false - all R or all T, true - mixed
     			full_type2, // boolean full_type2) {// false - quarter 3 is negated quarter 1, true - independent
     			DEBUG_LEVEL);
+    } else if (label.equals("Image Properties")) {
+        DEBUG_LEVEL=MASTER_DEBUG_LEVEL;
+		ImagePlus imp_sel = WindowManager.getCurrentImage();
+		if (imp_sel==null){
+			IJ.showMessage("Error","There are no images open\nProcess canceled");
+			return;
+		}
+		(new JP46_Reader_camera(false)).decodeProperiesFromInfo(imp_sel);
+		ArrayList<String> prop_kv = new ArrayList<String>();
+		Set<Object> jp4_set;
+		Properties jp4_prop;
+		Iterator<Object> itr;
+		String str;
+		jp4_prop=imp_sel.getProperties();
+		if (jp4_prop!=null) {
+			jp4_set=jp4_prop.keySet();
+			itr=jp4_set.iterator();
+			while(itr.hasNext()) {
+				str = (String) itr.next();
+				//				if (!str.equals("Info")) info+="<"+str+">\""+jp4_prop.getProperty(str)+"\"</"+str+">";
+				if (!str.equals("Info")) {
+					prop_kv.add(str+"|"+jp4_prop.getProperty(str));
+				}
+			}
+		}
+		Collections.sort(prop_kv);
+		prop_kv.add("|"); // empty item to add new property
+		GenericDialog gd = new GenericDialog("Edit properties");
+		gd.addMessage("Use empty string to remove property, quoted empty - to set zero length, "+
+		              "name|value for value to set a new property");
+		String [] names = new String[prop_kv.size()];
+		for (int ii = 0; ii < prop_kv.size(); ii++) {
+			String s = (String) prop_kv.get(ii);
+			int sep = s.indexOf("|");
+			if (sep < 0) {
+				sep = s.length();
+			}
+			String name = s.substring(0, sep);
+			names[ii] = name;
+			String val = (sep == s.length()) ? "": s.substring(sep + 1);
+			gd.addStringField(ii+": "+name, val, 20);
+		}
+		WindowTools.addScrollBars(gd);
+		gd.showDialog();
+		if (gd.wasCanceled()) return;
+		for (int ii = 0; ii < prop_kv.size(); ii++) {
+			String name = names[ii];
+			String val = gd.getNextString();
+			int sep = val.indexOf("|");
+			if (sep > 0) { // ignore existing key, set a key/value pair
+				name = val.substring(0, sep);
+				val = val.substring(sep + 1);
+			} else if (val.length() == 0) {
+				val = null;
+			} else {
+				val = val.replaceAll("^\"+|\"+$", ""); // remove leading/trailing "
+			}
+			if (name.length() > 0) {
+				imp_sel.setProperty(name, val);
+			}
+		}
+		(new JP46_Reader_camera(false)).encodeProperiesToInfo(imp_sel);
 //JTabbedTest
 // End of buttons code
     }

src/main/java/com/elphel/imagej/tileprocessor/CorrVector.java

@@ -139,7 +139,7 @@ public class CorrVector{ // TODO: Update to non-quad (extract to a file first)?
 		return derivs;
 	}
 	public Matrix [] getRotMatricesDbg() {
-		Matrix [] rots = new Matrix [4];
+		Matrix [] rots = new Matrix [getNumSensors()];
 		double [] azimuths = getAzimuths();
 		double [] tilts =    getTilts();
 		double [] rolls =    getFullRolls();
@@ -183,7 +183,7 @@ public class CorrVector{ // TODO: Update to non-quad (extract to a file first)?
 
 	public Matrix [][] getRotDeriveMatricesDbg() // USED in lwir
 	{
-		Matrix [][] rot_derivs = new Matrix [4][4]; // channel, azimuth-tilt-roll-zoom
+		Matrix [][] rot_derivs = new Matrix [getNumSensors()][4]; // channel, azimuth-tilt-roll-zoom
 		double [] azimuths = getAzimuths();
 		double [] tilts =    getTilts();
 		double [] rolls =    getFullRolls();
@@ -283,7 +283,7 @@ public class CorrVector{ // TODO: Update to non-quad (extract to a file first)?
 
 	public Matrix [] getRotMatrices() // USED in lwir TODO: Update to non-quad!
 	{
-		Matrix [] rots = new Matrix [4];
+		Matrix [] rots = new Matrix [getNumSensors()];
 		double [] azimuths = getAzimuths();
 		double [] tilts =    getTilts();
 		double [] rolls =    getFullRolls();
@@ -323,7 +323,7 @@ public class CorrVector{ // TODO: Update to non-quad (extract to a file first)?
 //TODO: UPDATE to include scales
 	public Matrix [][] getRotDeriveMatrices() // USED in lwir
 	{
-		Matrix [][] rot_derivs = new Matrix [4][4]; // channel, azimuth-tilt-roll-zoom
+		Matrix [][] rot_derivs = new Matrix [getNumSensors()][4]; // channel, azimuth-tilt-roll-zoom
 		double [] azimuths = getAzimuths();
 		double [] tilts =    getTilts();
 		double [] rolls =    getFullRolls();

src/main/java/com/elphel/imagej/tileprocessor/QuadCLTCPU.java

@@ -3061,8 +3061,8 @@ public class QuadCLTCPU {
 
 		  return result;
 	  }
-
-	  public void processCLTQuads( // not used in lwir
+	  @Deprecated
+	  public void processCLTQuads( // not used in lwir uses quad
 			  CLTParameters           clt_parameters,
 			  EyesisCorrectionParameters.DebayerParameters     debayerParameters,
 			  ColorProcParameters colorProcParameters,
@@ -3290,8 +3290,9 @@ public class QuadCLTCPU {
 		  System.out.println("processCLTQuads(): processing "+fileIndices.length+" files finished at "+
 				  IJ.d2s(0.000000001*(System.nanoTime()-this.startTime),3)+" sec, --- Free memory="+Runtime.getRuntime().freeMemory()+" (of "+Runtime.getRuntime().totalMemory()+")");
 	  }
-
-	  public ImagePlus [] processCLTQuad( // not used in lwir
+	  
+	  @Deprecated
+	  public ImagePlus [] processCLTQuad( // not used in lwir uses quad
 			  ImagePlus [] imp_quad, // should have properties "name"(base for saving results), "channel","path"
 			  CLTParameters           clt_parameters,
 			  EyesisCorrectionParameters.DebayerParameters     debayerParameters,