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imagej-elphel
Commit 3a62a4a1 authored by Andrey Filippov's avatar Andrey Filippov
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Calculating DSI stats over multiple images

parent 848f691d
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Showing with 629 additions and 32 deletions
src/main/java/Eyesis_Correction.java
View file @ 3a62a4a1
......@@ -104,7 +104,8 @@ private Panel panel1,
panelClt1,
panelClt2,
panelClt3,
panelClt4
panelClt4,
panelClt5
;
JP46_Reader_camera JP4_INSTANCE=null;
......@@ -396,13 +397,14 @@ private Panel panel1,
Color color_configure= new Color(200, 200,160);
Color color_process= new Color(180, 180, 240);
Color color_conf_process= new Color(180, 240, 240);
Color color_restore= new Color(180, 240, 180);
Color color_restore= new Color(160, 240, 160);
Color color_stop= new Color(255, 160, 160);
Color color_report= new Color(180, 220, 180);
instance = this;
addKeyListener(IJ.getInstance());
int menuRows=4 + (ADVANCED_MODE?4:0) + (MODE_3D?3:0) + (DCT_MODE?5:0);
int menuRows=4 + (ADVANCED_MODE?4:0) + (MODE_3D?3:0) + (DCT_MODE?6:0);
setLayout(new GridLayout(menuRows, 1));
panel6 = new Panel();
......@@ -544,7 +546,7 @@ private Panel panel1,
addButton("CLT reset fine corr", panelClt2, color_stop);
addButton("CLT reset extrinsic corr", panelClt2, color_stop);
addButton("CLT show geometry", panelClt2, color_configure);
addButton("CLT show fine corr", panelClt2, color_configure);
addButton("CLT show fine corr", panelClt2, color_report);
addButton("CLT apply fine corr", panelClt2, color_process);
addButton("CLT test fine corr", panelClt2, color_process);
addButton("CLT process fine corr", panelClt2, color_conf_process);
......@@ -568,8 +570,8 @@ private Panel panel1,
addButton("Setup CLT Batch parameters", panelClt3, color_configure);
addButton("CLT batch process", panelClt3, color_process);
addButton("CM Test", panelClt3, color_stop);
addButton("Show scan", panelClt3, color_configure);
addButton("Show all scans", panelClt3, color_configure);
addButton("Show scan", panelClt3, color_report);
addButton("Show all scans", panelClt3, color_report);
addButton("Periodic", panelClt3, color_configure);
add(panelClt3);
}
......@@ -585,8 +587,8 @@ private Panel panel1,
// addButton("CLT 2*4 images - 3", panelClt4, color_conf_process);
addButton("Rig offset", panelClt4, color_configure);
addButton("Save offset", panelClt4, color_process);
addButton("SHOW extrinsics", panelClt4, color_configure);
addButton("LIST extrinsics", panelClt4, color_configure);
addButton("SHOW extrinsics", panelClt4, color_report);
// addButton("LIST extrinsics", panelClt4, color_configure);
addButton("RIG DSI", panelClt4, color_conf_process);
addButton("MAIN extrinsics", panelClt4, color_process);
addButton("AUX extrinsics", panelClt4, color_process);
......@@ -599,17 +601,24 @@ private Panel panel1,
// /"Reset GT"
addButton("Reset GT", panelClt4, color_stop);
addButton("Ground truth", panelClt4, color_conf_process);
addButton("Show biscan", panelClt4, color_configure);
addButton("Show biscan", panelClt4, color_report);
addButton("Poles GT", panelClt4, color_process);
addButton("ML export", panelClt4, color_conf_process);
addButton("JP4 copy", panelClt4, color_conf_process);
addButton("DSI show", panelClt4, color_process);
addButton("DSI show", panelClt4, color_report);
addButton("Rig batch", panelClt4, color_process);
add(panelClt4);
}
if (DCT_MODE) {
panelClt5 = new Panel();
panelClt5.setLayout(new GridLayout(1, 0, 5, 5)); // rows, columns, vgap, hgap
addButton("LIST extrinsics", panelClt5, color_report);
addButton("DSI histogram", panelClt5, color_report);
add(panelClt5);
}
pack();
GUI.center(this);
......@@ -4583,6 +4592,10 @@ private Panel panel1,
} else if (label.equals("LIST extrinsics")) {
listExtrinsics();
return;
/* ======================================================================== */
} else if (label.equals("DSI histogram")) {
dsiHistogram();
return;
/* ======================================================================== */
} else if (label.equals("Reset GT")) {
......@@ -5597,11 +5610,22 @@ private Panel panel1,
if (dir!=null) {
System.out.println("top directory = "+dir);
}
//listExtrinsics(String dir, String mask)
// if (TWO_QUAD_CLT == null) {
// return false;
// }
return TwoQuadCLT.listExtrinsics(dir); // , mask);
// return TwoQuadCLT.listExtrinsics(dir); // , mask);
return MLStats.listExtrinsics(dir); // , mask);
//(new MLStats).
}
public boolean dsiHistogram() {
String dir= CalibrationFileManagement.selectDirectory(
false, // true, // smart,
false, // newAllowed, // save
"Model directories to scan", // title
"Select", // button
null, // filter
CORRECTION_PARAMETERS.x3dDirectory); //this.sourceDirectory);
if (dir!=null) {
System.out.println("top directory = "+dir);
}
return MLStats.dsiHistogram(dir); // , mask);
}
public boolean showDSI() {
......
src/main/java/MLStats.java 0 → 100644
View file @ 3a62a4a1
This diff is collapsed.
src/main/java/TwoQuadCLT.java
View file @ 3a62a4a1
......@@ -21,34 +21,20 @@
**
*/
import java.io.File;
import java.io.FileInputStream;
import java.io.FileNotFoundException;
import java.io.FileOutputStream;
import java.io.IOException;
import java.io.InputStream;
import java.io.OutputStream;
import java.nio.file.FileVisitOption;
import java.nio.file.FileVisitResult;
import java.nio.file.Files;
import java.nio.file.Path;
import java.nio.file.Paths;
import java.nio.file.SimpleFileVisitor;
import java.nio.file.StandardCopyOption;
import java.nio.file.attribute.BasicFileAttributes;
import java.util.ArrayList;
import java.util.Collections;
import java.util.Comparator;
import java.util.EnumSet;
import java.util.List;
import java.util.Properties;
import ij.IJ;
import ij.ImagePlus;
import ij.ImageStack;
import ij.Prefs;
import ij.gui.GenericDialog;
import ij.io.FileSaver;
import ij.text.TextWindow;
public class TwoQuadCLT {
public static int DSI_DISPARITY_MAIN = 0;
......@@ -6350,6 +6336,7 @@ if (debugLevel > -100) return true; // temporarily !
System.out.println("Configuration parameters are saved to "+path);
}
}
/*
public static boolean listExtrinsics(String dir) // , String mask)
{
Path path= Paths.get(dir);
......@@ -6756,5 +6743,5 @@ if (debugLevel > -100) return true; // temporarily !
// getAllProperties(properties);
// if (DEBUG_LEVEL>0) System.out.println("Configuration parameters are restored from "+path);
}
*/
}
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