Implemented fast/slow targets

src/main/java/com/elphel/imagej/cuas/Cuas.java

@@ -327,13 +327,17 @@ public class Cuas {
     				tilesX,          // int     width,      // only used if restored from tiff, ignored for .cuas
     				dts,             // double  dts,        // time stamp as double, only used if restored from tiff, ignored for .cuas
     				debugLevel);     // int     debugLevel)
-    		if (debugLevel > -3) {
+    		if (debugLevel > -4) {
     			if (cuasData != null) {
     				System.out.println("createCenterClt(): read cumulative parent data from "+cumulative_parent_dir_path);
     			} else {
     				System.out.println("createCenterClt(): FAILED to read cumulative parent data from "+cumulative_parent_dir_path);
     			}
     		}
+    	} else {
+    		if (debugLevel > -4) {
+    				System.out.println("createCenterClt(): using new average");
+    		}
     	}
 
     	CuasData newCuasData = getTDComboSceneSequence(

src/main/java/com/elphel/imagej/cuas/CuasMotionLMA.java

@@ -77,8 +77,9 @@ public class CuasMotionLMA {
 	public static final int RSLT_QMATCH_LEN=34;
 	public static final int RSLT_QSCORE =  35;
 	public static final int RSLT_STRONGER =36; // index of stronger neighbor (may be more)
-	public static final int RSLT_WHEN =    37;
-	public static final int RSLT_FAIL =    38;
+	public static final int RSLT_SLOW =    37; // 1 - slow, 0 - fast 
+	public static final int RSLT_WHEN =    38;
+	public static final int RSLT_FAIL =    39;
 	
 	public static final int RSLT_LEN = RSLT_FAIL+1;
 	

src/main/java/com/elphel/imagej/tileprocessor/OpticalFlow.java

@@ -7282,8 +7282,8 @@ public class OpticalFlow {
 		String [] bkp_sourcePaths =   quadCLT_main.correctionsParameters.sourcePaths;
 		boolean bkp_use_set_dirs = quadCLT_main.correctionsParameters.use_set_dirs;
 		
-    	String bkp_cuasUasLogs =            quadCLT_main.correctionsParameters.cuasSkyMask;      // TIFF image 640x512 where 1.0 - sky, 0.0 - ground, blurred with GB (now sigma==2.0)
-    	String bkp_cuasSkyMask =            quadCLT_main.correctionsParameters.cuasUasLogs;      // json file path containing UAS logs
+    	String bkp_cuasUasLogs =            quadCLT_main.correctionsParameters.cuasUasLogs;      // TIFF image 640x512 where 1.0 - sky, 0.0 - ground, blurred with GB (now sigma==2.0)
+    	String bkp_cuasSkyMask =            quadCLT_main.correctionsParameters.cuasSkyMask;      // json file path containing UAS logs
     	double bkp_cuasUasTimeStamp =       quadCLT_main.correctionsParameters.cuasUasTimeStamp; // 0.0; // timestamp corresponding to the UAS time 0.0
     	double [] bkp_cuasCameraATR =       quadCLT_main.correctionsParameters.cuasCameraATR;    //{0, 0, 0};
     	double [] bkp_cuasUASHome =       quadCLT_main.correctionsParameters.cuasUASHome;    //{0, 0, 0};

src/main/java/com/elphel/imagej/tileprocessor/TwoQuadCLT.java

@@ -8635,8 +8635,8 @@ if (debugLevel > -100) return true; // temporarily !
 		if (quadCLT_main.correctionsParameters.useCuasSeedDir) {
 			cuas_centers = new String [] {quadCLT_main.correctionsParameters.cuasSeedDir,""};
 		}
-		if (debugLevel > -4) {
-			System.out.println("cuas_centers="+((cuas_centers != null)?("[\""+cuas_centers[0]+"\",\""+cuas_centers[1]+"\"]"):"null"));
+		if (debugLevel > -4){
+			System.out.println("2. cuas_centers="+((cuas_centers != null)?("[\""+cuas_centers[0]+"\",\""+cuas_centers[1]+"\"]"):"null"));
 		}
 		/*
 		if ((quadCLT_main.correctionsParameters.cuasSeed != null) && (quadCLT_main.correctionsParameters.cuasSeed.length()>0)) {
@@ -8685,12 +8685,15 @@ if (debugLevel > -100) return true; // temporarily !
 			// Process UAS logs 
 			UasLogReader uasLogReader = null;
 			String uas_log_path = quadCLT_main.correctionsParameters.getUasLogsPath();
+			System.out.println("Using UAS log file: "+uas_log_path);
 			if ((uas_log_path != null) && (uas_log_path.length() > 0)) {
 				uasLogReader = new UasLogReader(uas_log_path, quadCLT_main.correctionsParameters.cuasUasTimeStamp, null, quadCLT_main);
 				uasLogReader.setCameraATR(quadCLT_main.correctionsParameters.cuasCameraATR);
 				uasLogReader.setUASHomeNed(quadCLT_main.correctionsParameters.cuasSetHome? quadCLT_main.correctionsParameters.cuasUASHome : null);
 			}
-			
+			if (debugLevel > -4)  {
+				System.out.println("cuas_centers="+((cuas_centers != null)?("[\""+cuas_centers[0]+"\",\""+cuas_centers[1]+"\"]"):"null"));
+			}
 			
 			while ((ref_index < 0) || ((ref_index + 1) >= min_num_scenes)) {
 				String model_directory = opticalFlow.buildSeries(
@@ -8715,6 +8718,10 @@ if (debugLevel > -100) return true; // temporarily !
 						threadsMax,                // final int        threadsMax,  // maximal number of threads to launch
 						updateStatus, // final boolean    updateStatus,
 						debugLevel+2); // final int        debugLevel)
+				if (debugLevel > -4){
+					System.out.println("3. cuas_centers="+((cuas_centers != null)?("[\""+cuas_centers[0]+"\",\""+cuas_centers[1]+"\"]"):"null"));
+				}
+
 				if (model_directory == null) {
 					// TODO: Save continuation after failure not to retry each run
 					System.out.println("Failed to build sequence for series "+ref_index);
@@ -8784,6 +8791,10 @@ if (debugLevel > -100) return true; // temporarily !
 							link.delete();
 						}
 						Files.createSymbolicLink(link.toPath(), pathRelative);
+						if (debugLevel > -4){
+							System.out.println("createSymbolicLink "+pathRelative+" -> "+link.toPath());
+						}
+
 					}
 //					cuas_centers[0] = cuas_centers[1];
 //					cuas_centers[1] = ""; 
@@ -8797,7 +8808,14 @@ if (debugLevel > -100) return true; // temporarily !
 			} // while ((ref_index < 0) || ((ref_index + 1) >= min_num_scenes)) {
 			if ((cuas_centers != null) && (cuas_centers[1] != null) && (cuas_centers[1].length()>0)) {
 				cuas_centers[0] = cuas_centers[1];
-				cuas_centers[1] = ""; 
+				cuas_centers[1] = "";
+				if (debugLevel > -4){
+					System.out.println("4. cuas_centers="+((cuas_centers != null)?("[\""+cuas_centers[0]+"\",\""+cuas_centers[1]+"\"]"):"null"));
+				}
+
+			}
+			if (debugLevel > -4){
+				System.out.println("5. cuas_centers="+((cuas_centers != null)?("[\""+cuas_centers[0]+"\",\""+cuas_centers[1]+"\"]"):"null"));
 			}
 		} // for (int nseq = 0; nseq < num_seq; nseq++) {