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imagej-elphel
Commit ca083ffb authored by Andrey Filippov's avatar Andrey Filippov
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fixed wrong kernel size for LWIR

parent 7c10a29b
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Showing with 50 additions and 10 deletions
src/main/java/com/elphel/imagej/calibration/Aberration_Calibration.java
View file @ ca083ffb
......@@ -157,11 +157,20 @@ public class Aberration_Calibration extends PlugInFrame implements ActionListene
public static EyesisAberrations.InterpolateParameters INTERPOLATE= new EyesisAberrations.InterpolateParameters (
32, // insize - size of each kernel (should be square)
4, // step - number of subdivisions from input to output
17, // add_top - add this number of kernel rows to the output above the existent/interpolated
17, // add_left - add this number of kernel columns to the output on the left of the existent/interpolated
18, // add_right - add this number of kernel columns to the output on the right of the existent/interpolated
17, // add_bottom - add this number of kernel rows to the output below the existent/interpolated
2, // step - number of subdivisions from input to output
9, // add_top - add this number of kernel rows to the output above the existent/interpolated
8, // add_left - add this number of kernel columns to the output on the left of the existent/interpolated
9, // add_right - add this number of kernel columns to the output on the right of the existent/interpolated
9, // add_bottom - add this number of kernel rows to the output below the existent/interpolated
0.0 // extrapolate - 0.0 - duplicate, 1.0 - extrapolate outside of the known kernels
);
public static EyesisAberrations.InterpolateParameters INTERPOLATE_LWIR= new EyesisAberrations.InterpolateParameters (
32, // insize - size of each kernel (should be square)
1, // step - number of subdivisions from input to output
8, // add_top - add this number of kernel rows to the output above the existent/interpolated
8, // add_left - add this number of kernel columns to the output on the left of the existent/interpolated
9, // add_right - add this number of kernel columns to the output on the right of the existent/interpolated
9, // add_bottom - add this number of kernel rows to the output below the existent/interpolated
0.0 // extrapolate - 0.0 - duplicate, 1.0 - extrapolate outside of the known kernels
);
......@@ -1241,7 +1250,7 @@ if (MORE_BUTTONS) {
return;
/* ======================================================================== */
} else if (label.equals("Conf. Interpolation")) {
showInterpolateParametersDialog(INTERPOLATE);
showInterpolateParametersDialog(INTERPOLATE, INTERPOLATE_LWIR);
return;
/* ======================================================================== */
} else if (label.equals("Conf. Inversion")) {
......@@ -9072,6 +9081,7 @@ if (MORE_BUTTONS) {
boolean interpolatedOK= EYESIS_ABERRATIONS.interpolateKernels ( // save configuration to combined kernels directory before calling this methode
this.SYNC_COMMAND.stopRequested,
INTERPOLATE, // INTERPOLATE
INTERPOLATE_LWIR, // INTERPOLATE_LWIR
MULTIFILE_PSF , // MULTIFILE_PSF = new EyesisAberrations.MultiFilePSF(
true, // saveResult,
false, // showResult,
......@@ -11119,6 +11129,10 @@ if (MORE_BUTTONS) {
startTime-=(System.nanoTime()-tmpTime); // do not count time used for selection of files
filePaths=prepareInterpolateKernelsList(PROCESS_PARAMETERS);
for (fileNum=0;fileNum<filePaths.length;fileNum++) if ((filePaths[fileNum]!=null) && (filePaths[fileNum].length>0)) {
System.out.println("isLwir16()="+LWIR_PARAMETERS.isLwir16());
if (LWIR_PARAMETERS.isLwir16()) {
System.out.println("isLwir16()="+LWIR_PARAMETERS.isLwir16());
}
file=new File(filePaths[fileNum][0][0]);
if (!file.exists()) {
if (DEBUG_LEVEL>1) System.out.println("Raw PSF kernel stack file "+filePaths[fileNum][0][0]+" does not exist");
......@@ -16488,6 +16502,7 @@ private double [][] jacobianByJacobian(double [][] jacobian, boolean [] mask) {
if (select_SIMUL) SIMUL.setProperties( "SIMUL.", properties);
if (select_INTERPOLATE) INTERPOLATE.setProperties( "INTERPOLATE.", properties);
if (select_INTERPOLATE) INTERPOLATE_LWIR.setProperties( "INTERPOLATE_LWIR.", properties);
if (select_INVERSE) INVERSE.setProperties( "INVERSE.", properties);
if (select_PSF_PARS) PSF_PARS.setProperties( "PSF_PARS.", properties);
if (select_OTF_FILTER) OTF_FILTER.setProperties( "OTF_FILTER.", properties);
......@@ -16533,6 +16548,7 @@ private double [][] jacobianByJacobian(double [][] jacobian, boolean [] mask) {
SIMUL.getProperties("SIMUL.", properties);
INTERPOLATE.getProperties("INTERPOLATE.", properties);
INTERPOLATE_LWIR.getProperties("INTERPOLATE_LWIR.", properties);
INVERSE.getProperties("INVERSE.", properties);
PSF_PARS.getProperties("PSF_PARS.", properties);
OTF_FILTER.getProperties("OTF_FILTER.", properties);
......@@ -21224,7 +21240,9 @@ use the result to create a rejectiobn mask - if the energy was high, (multiplica
/* ======================================================================== */
/* ======================================================================== */
public boolean showInterpolateParametersDialog(EyesisAberrations.InterpolateParameters interpolateParameters) {
public boolean showInterpolateParametersDialog(
EyesisAberrations.InterpolateParameters interpolateParameters,
EyesisAberrations.InterpolateParameters interpolateParameters_lwir) {
GenericDialog gd = new GenericDialog("Interpolate kernels parameters");
gd.addNumericField("Input kernel size", interpolateParameters.size, 0); // 64
gd.addNumericField("Interpolation step between original kernels", interpolateParameters.step, 0); //4
......@@ -21233,6 +21251,16 @@ use the result to create a rejectiobn mask - if the energy was high, (multiplica
gd.addNumericField("Interpolation add on the right (in output, subdivided steps)", interpolateParameters.add_right, 0); //16
gd.addNumericField("Interpolation add on the bottom (in output, subdivided steps)", interpolateParameters.add_bottom, 0); //16
gd.addNumericField("Interpolation: extrapolate margins - 0.0 - duplicate, 1.0 - full extrapolate", interpolateParameters.extrapolate,3); //1.0
if (interpolateParameters_lwir!=null) {
gd.addMessage("LWIR (low-res mono) sensors:");
gd.addNumericField("Input kernel size", interpolateParameters_lwir.size, 0); // 64
gd.addNumericField("Interpolation step between original kernels", interpolateParameters_lwir.step, 0); //4
gd.addNumericField("Interpolation add on the top (in output, subdivided steps)", interpolateParameters_lwir.add_top, 0); //16
gd.addNumericField("Interpolation add on the left (in output, subdivided steps)", interpolateParameters_lwir.add_left, 0); //16
gd.addNumericField("Interpolation add on the right (in output, subdivided steps)", interpolateParameters_lwir.add_right, 0); //16
gd.addNumericField("Interpolation add on the bottom (in output, subdivided steps)", interpolateParameters_lwir.add_bottom, 0); //16
gd.addNumericField("Interpolation: extrapolate margins - 0.0 - duplicate, 1.0 - full extrapolate", interpolateParameters_lwir.extrapolate,3); //1.0
}
gd.showDialog();
if (gd.wasCanceled()) return false;
interpolateParameters.size= (int) gd.getNextNumber();
......@@ -21242,6 +21270,15 @@ use the result to create a rejectiobn mask - if the energy was high, (multiplica
interpolateParameters.add_right= (int) gd.getNextNumber();
interpolateParameters.add_bottom= (int) gd.getNextNumber();
interpolateParameters.extrapolate= gd.getNextNumber();
if (interpolateParameters_lwir!=null) {
interpolateParameters_lwir.size= (int) gd.getNextNumber();
interpolateParameters_lwir.step= (int) gd.getNextNumber();
interpolateParameters_lwir.add_top= (int) gd.getNextNumber();
interpolateParameters_lwir.add_left= (int) gd.getNextNumber();
interpolateParameters_lwir.add_right= (int) gd.getNextNumber();
interpolateParameters_lwir.add_bottom= (int) gd.getNextNumber();
interpolateParameters_lwir.extrapolate= gd.getNextNumber();
}
return true;
}
/* ======================================================================== */
src/main/java/com/elphel/imagej/calibration/EyesisAberrations.java
View file @ ca083ffb
......@@ -658,6 +658,7 @@ public class EyesisAberrations {
public boolean interpolateKernels(
AtomicInteger stopRequested, // 1 - stop now, 2 - when convenient
EyesisAberrations.InterpolateParameters interpolateParameters, // INTERPOLATE
EyesisAberrations.InterpolateParameters interpolateParameters_lwir, // INTERPOLATE
EyesisAberrations.MultiFilePSF multiFilePSF , // MULTIFILE_PSF = new EyesisAberrations.MultiFilePSF(
boolean saveResult,
boolean showResult,
......@@ -721,9 +722,11 @@ public class EyesisAberrations {
System.out.println("Need a 3-layer stack (for color) or single (for mono) with raw PSF kernels");
continue;
}
boolean is_mono = impSpsf.getStackSize() == 1;
System.out.println("Interpolating "+ (is_mono? "monochrome":"color") + " sensor kernel");
ImageStack stack= interpolateKernelStack(
impSpsf.getStack(), // Image stack, each slice consists of square kernels of one channel
interpolateParameters,
(is_mono?interpolateParameters_lwir:interpolateParameters),
updateStatus,
globalDebugLevel); // update status info
......
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