trying filtering by SIFT-like features for better averaging

src/main/java/com/elphel/imagej/correction/Eyesis_Correction.java

@@ -111,6 +111,7 @@ import com.elphel.imagej.jp4.JP46_Reader_camera;
 import com.elphel.imagej.lwir.LwirReader;
 import com.elphel.imagej.orthomosaic.OrthoMap;
 import com.elphel.imagej.orthomosaic.ComboMatch;
+import com.elphel.imagej.orthomosaic.OrangeTest;
 import com.elphel.imagej.readers.ChangeImageResolution;
 import com.elphel.imagej.readers.DumpImageMetadata;
 import com.elphel.imagej.readers.ElphelTiffReader;
@@ -165,7 +166,7 @@ public class Eyesis_Correction implements PlugIn, ActionListener {
 //	private static final long serialVersionUID = -1507307664341265263L;
 	private Panel panel1, panel2, panel3, panel4, panel5, panel5a, panel6, panel7, panelPostProcessing1,
 			panelPostProcessing2, panelPostProcessing3, panelDct1, panelClt1, panelClt2, panelClt3, panelClt4,
-			panelClt5, panelClt5aux, panelClt_GPU, panelLWIR, panelLWIR16, panelLWIRWorld;
+			panelClt5, panelClt5aux, panelClt_GPU, panelLWIR, panelLWIR16, panelLWIRWorld, panelOrange;
 	JP46_Reader_camera JP4_INSTANCE = null;
 
 //   private deBayerScissors debayer_instance;
@@ -532,7 +533,7 @@ public class Eyesis_Correction implements PlugIn, ActionListener {
 		plugInFrame.addKeyListener(IJ.getInstance());
 //		int menuRows=4 + (ADVANCED_MODE?4:0) + (MODE_3D?3:0) + (DCT_MODE?6:0) + (GPU_MODE?1:0) +(LWIR_MODE?2:0);
 		int menuRows = 4 + (ADVANCED_MODE ? 4 : 0) + (MODE_3D ? 3 : 0) + (DCT_MODE ? 7 : 0) + (GPU_MODE ? 1 : 0)
-				+ (LWIR_MODE ? 3 : 0);
+				+ (LWIR_MODE ? 4 : 0);
 		plugInFrame.setLayout(new GridLayout(menuRows, 1));
 		panel6 = new Panel();
 		panel6.setLayout(new GridLayout(1, 0, 5, 5));
@@ -861,6 +862,11 @@ public class Eyesis_Correction implements PlugIn, ActionListener {
 			addButton("Properties compare",  panelLWIRWorld, color_process);
 			plugInFrame.add(panelLWIRWorld);
 
+			panelOrange = new Panel();
+			panelOrange.setLayout(new GridLayout(1, 0, 5, 5)); // rows, columns, vgap, hgap
+			addButton("Test Orange", panelOrange, color_process);
+			addButton("Process Merged", panelOrange, color_process);
+			plugInFrame.add(panelOrange);
 		}
 		plugInFrame.pack();
 //"LWIR batch"
@@ -5788,7 +5794,12 @@ public class Eyesis_Correction implements PlugIn, ActionListener {
 			OrthoMap.testPatternCorrelate(imp_sel);
 		} else if (label.equals("Properties compare")) {
 			QuadCLTCPU.compareProperties();
+		} else if (label.equals("Test Orange")) {
+			OrangeTest.testOrange();			
+		} else if (label.equals("Process Merged")) {
+			OrangeTest.processMerged();			
 		}
+		//
 	}
 // 
 	public boolean debugInitOneScene() {

src/main/java/com/elphel/imagej/orthomosaic/ComboMatch.java

@@ -2524,10 +2524,10 @@ adjusted affines[1] for a pair: 1694564291_293695/1694564778_589341
 				{  0,   0, sxy, sy2,  0, sy},
 				{  0,   0,  sx,  sy,  0, s0}};
 		Matrix A = new Matrix(a);
-		A.print(15,4);
+//		A.print(15,4);
 		double [][] b = {{sxu,syu,su,sxv,syv,sv}};
 		Matrix B = new Matrix(b).transpose();
-		B.print(15,4);
+//		B.print(15,4);
 		double [] v = A.solve(B).getRowPackedCopy();
 		double [][] ab = {
 				{v[0], v[1]},   // |a00, a01|,
@@ -2535,6 +2535,7 @@ adjusted affines[1] for a pair: 1694564291_293695/1694564778_589341
 				{v[4], v[5]}};  // | b0,  b1|,
 		return ab;	
 	}
+	
 	public static boolean testReadTiff() {
 		String image_paths="";