adding sennor_port to Eyesis correction

src/main/java/PixelMapping.java

@@ -25,10 +25,14 @@
 **
 */
 
+import java.awt.Point;
 import java.awt.Rectangle;
 import java.io.IOException;
 import java.util.ArrayList;
+import java.util.Arrays;
 import java.util.BitSet;
+import java.util.Collections;
+import java.util.Comparator;
 import java.util.List;
 import java.util.concurrent.atomic.AtomicInteger;
 
@@ -147,6 +151,8 @@ public class PixelMapping {
     	return (this.sensors != null) && (channel>=0)  && (channel<this.sensors.length) && (this.sensors[channel]!=null);
     }
 
+/*
+    
     public int [] channelsForSubCamera(int subCamera){
     	if (this.sensors == null) return null;
     	int numChannels=0;
@@ -156,6 +162,51 @@ public class PixelMapping {
     	for (int i=0;i<this.sensors.length;i++) if ((this.sensors[i]!=null) &&(this.sensors[i].subcamera==subCamera)) result[numChannels++]=i;
     	return result;
     }
+    
+ */
+    // Updating for nc393. subCamera here is 0..9 for Eyesis4pi393 - 0-based index of the file, so it combines physical camera (separate IP)
+    // as stored in "subcamera" field of the calibration file and "sensor_port". sensor_port may start from non-0, so we need to count all combinations
+    
+    public int [] channelsForSubCamera(int subCamera){
+//    	ArrayList<ArrayList<ArrayList<Integer>>> camera_IPs = new ArrayList<ArrayList<ArrayList<Integer>>>(); 
+    	ArrayList<Point> cam_port = new ArrayList<Point>();
+    	for (int i=0;i<this.sensors.length;i++)  if (this.sensors[i]!=null) {
+    		Point cp = new Point(this.sensors[i].subcamera, this.sensors[i].sensor_port);
+    		if (!cam_port.contains(cp)){
+    			cam_port.add(cp);
+    		}
+    	}
+    	Point [] cam_port_arr = cam_port.toArray(new Point[0]);
+		Arrays.sort(cam_port_arr, new Comparator<Point>() {
+			@Override
+			public int compare(Point o1, Point o2) {
+				return (o1.x>o2.x)? 1:((o1.x < o2.x)?-1:(o1.y > o2.y)? 1:((o1.y < o2.y)?-1:0)); 
+			}
+		});
+		for (int i=0; i<cam_port_arr.length;i++){
+			System.out.println("----- physical camera #"+cam_port_arr[i].x+", sensor_port="+cam_port_arr[i].y);
+		}
+		System.out.println("----- This ("+subCamera+") physical camera #"+cam_port_arr[subCamera].x+", sensor_port="+cam_port_arr[subCamera].y);
+		
+		if (subCamera >= cam_port_arr.length) {
+			System.out.println("Error: Subcamera "+subCamera+" > that total namera of sensor ports in the system = "+cam_port_arr.length);
+			return null; 
+		}
+    	if (this.sensors == null) return null;
+    	int numChannels=0;
+    	for (int i=0;i<this.sensors.length;i++) if (this.sensors[i]!=null) {
+    		if (new Point(this.sensors[i].subcamera, this.sensors[i].sensor_port).equals(cam_port_arr[subCamera])) numChannels++;
+    	}
+    	int [] result=new int [numChannels];
+    	numChannels=0;
+    	for (int i=0;i<this.sensors.length;i++) if (this.sensors[i]!=null){
+    		if (new Point(this.sensors[i].subcamera, this.sensors[i].sensor_port).equals(cam_port_arr[subCamera])) result[numChannels++]=i;
+    	}
+    	return result;
+    }
+    
+    
+    
     public void removeChannel(int channel){
     	if ((this.sensors != null) && (channel>=0)  && (channel<this.sensors.length)) this.sensors[channel]=null;
     }