More debug images

src/main/java/com/elphel/imagej/cuas/CuasMotion.java

@@ -3598,11 +3598,43 @@ public class CuasMotion {
 			boolean save_filtered_high = intermed_high && (niter < iter_show);
 			boolean save_filtered_giga = intermed_giga && (niter < iter_show);
 			
+			if (save_filtered_low) {
+				//title_vf_all					
+				ImagePlus imp_ms1 = showVectorFieldsSequence(
+						motion_scan,          // double [][][] vector_fields_sequence,
+						speed_min,            // double        speed_min,		
+						speed_pref,           // double        speed_pref,		
+						speed_boost,          // double        speed_boost, 
+						slice_titles,         // String []     titles, // all slices*frames titles or just slice titles or null
+						model_prefix+"MS1-n"+niter,// String        title,
+						false,                // boolean       nan_effective_strength,
+						!batch_mode,          // boolean       show,
+						cuasMotion.tilesX);   //  int           tilesX) {
+				parentCLT.saveImagePlusInModelDirectory(imp_ms1);
+			}			
+			
 			// remove known bad targets. TODO: maybe will need to modify corr2d and recalculate, if the same tile is shared by a target and background 
 			motion_scan  = subtractMotionScans( // motion vectors
 					motion_scan, // double [][][] scan0, // all tried for targets
 					targets_bad, // double [][][] scan1) // good targets
 					remain);
+			if (save_filtered_low) {
+				//title_vf_all					
+				ImagePlus imp_ms1 = showVectorFieldsSequence(
+						motion_scan,          // double [][][] vector_fields_sequence,
+						speed_min,            // double        speed_min,		
+						speed_pref,           // double        speed_pref,		
+						speed_boost,          // double        speed_boost, 
+						slice_titles,         // String []     titles, // all slices*frames titles or just slice titles or null
+						model_prefix+"MS1-NOBAD-n"+niter,// String        title,
+						false,                // boolean       nan_effective_strength,
+						!batch_mode,          // boolean       show,
+						cuasMotion.tilesX);   //  int           tilesX) {
+				parentCLT.saveImagePlusInModelDirectory(imp_ms1);
+			}			
+			
+			
+			
 			if (debugLevel > -4) printRemain(remain, "motion_scan wo bad", true);
 			// filter remaining (no known bad ones)
 			boolean[][] filter5 = filterMotionScan(
@@ -3618,8 +3650,8 @@ public class CuasMotion {
 			if (save_filtered_low) {
  				ImagePlus imp_filter5 = ShowDoubleFloatArrays.makeArrays(
  						filter5, // double[][] pixels,
-						cuasMotion.gpu_max_width,
-						cuasMotion.gpu_max_height, 
+ 						cuasMotion.tilesX,
+						cuasMotion.tilesY, 
 						model_prefix+"-FILTER5-n"+niter,   // String title,
 						slice_titles);
 				if (!batch_mode) {