Skip to content
Projects
Groups
Snippets
Help
Loading...
Help
Submit feedback
Contribute to GitLab
Sign in
Toggle navigation
I
imagej-elphel
Project
Project
Details
Activity
Releases
Cycle Analytics
Repository
Repository
Files
Commits
Branches
Tags
Contributors
Graph
Compare
Charts
Issues
3
Issues
3
List
Board
Labels
Milestones
Wiki
Wiki
Members
Members
Collapse sidebar
Close sidebar
Activity
Graph
Charts
Create a new issue
Commits
Issue Boards
Open sidebar
Elphel
imagej-elphel
Commits
86cdc8a0
Commit
86cdc8a0
authored
Apr 08, 2017
by
Andrey Filippov
Browse files
Options
Browse Files
Download
Email Patches
Plain Diff
debugging planes merging
parent
1361f670
Changes
4
Expand all
Show whitespace changes
Inline
Side-by-side
Showing
4 changed files
with
236 additions
and
22 deletions
+236
-22
EyesisCorrectionParameters.java
src/main/java/EyesisCorrectionParameters.java
+5
-0
SuperTiles.java
src/main/java/SuperTiles.java
+59
-16
TilePlanes.java
src/main/java/TilePlanes.java
+169
-5
TileProcessor.java
src/main/java/TileProcessor.java
+3
-1
No files found.
src/main/java/EyesisCorrectionParameters.java
View file @
86cdc8a0
...
...
@@ -2149,6 +2149,7 @@ public class EyesisCorrectionParameters {
public
int
plMaxOutliers
=
20
;
// Maximal number of outliers to remove
public
double
plMinStrength
=
0.1
;
// Minimal total strength of a plane
public
double
plMaxEigen
=
0.3
;
// Maximal eigenvalue of a plane
public
boolean
plDbgMerge
=
true
;
// Combine 'other' plane with current
// other debug images
public
boolean
show_ortho_combine
=
false
;
// Show 'ortho_combine'
...
...
@@ -2389,6 +2390,7 @@ public class EyesisCorrectionParameters {
properties
.
setProperty
(
prefix
+
"plMaxOutliers"
,
this
.
plMaxOutliers
+
""
);
properties
.
setProperty
(
prefix
+
"plMinStrength"
,
this
.
plMinStrength
+
""
);
properties
.
setProperty
(
prefix
+
"plMaxEigen"
,
this
.
plMaxEigen
+
""
);
properties
.
setProperty
(
prefix
+
"plDbgMerge"
,
this
.
plDbgMerge
+
""
);
properties
.
setProperty
(
prefix
+
"show_ortho_combine"
,
this
.
show_ortho_combine
+
""
);
properties
.
setProperty
(
prefix
+
"show_refine_supertiles"
,
this
.
show_refine_supertiles
+
""
);
...
...
@@ -2620,6 +2622,7 @@ public class EyesisCorrectionParameters {
if
(
properties
.
getProperty
(
prefix
+
"plMaxOutliers"
)!=
null
)
this
.
plMaxOutliers
=
Integer
.
parseInt
(
properties
.
getProperty
(
prefix
+
"plMaxOutliers"
));
if
(
properties
.
getProperty
(
prefix
+
"plMinStrength"
)!=
null
)
this
.
plMinStrength
=
Double
.
parseDouble
(
properties
.
getProperty
(
prefix
+
"plMinStrength"
));
if
(
properties
.
getProperty
(
prefix
+
"plMaxEigen"
)!=
null
)
this
.
plMaxEigen
=
Double
.
parseDouble
(
properties
.
getProperty
(
prefix
+
"plMaxEigen"
));
if
(
properties
.
getProperty
(
prefix
+
"plDbgMerge"
)!=
null
)
this
.
plDbgMerge
=
Boolean
.
parseBoolean
(
properties
.
getProperty
(
prefix
+
"plDbgMerge"
));
if
(
properties
.
getProperty
(
prefix
+
"show_ortho_combine"
)!=
null
)
this
.
show_ortho_combine
=
Boolean
.
parseBoolean
(
properties
.
getProperty
(
prefix
+
"show_ortho_combine"
));
if
(
properties
.
getProperty
(
prefix
+
"show_refine_supertiles"
)!=
null
)
this
.
show_refine_supertiles
=
Boolean
.
parseBoolean
(
properties
.
getProperty
(
prefix
+
"show_refine_supertiles"
));
...
...
@@ -2873,6 +2876,7 @@ public class EyesisCorrectionParameters {
gd
.
addNumericField
(
"Maximal number of outliers to remove"
,
this
.
plMaxOutliers
,
0
);
gd
.
addNumericField
(
"Minimal total strength of a plane"
,
this
.
plMinStrength
,
6
);
gd
.
addNumericField
(
"Maximal eigenvalue of a plane"
,
this
.
plMaxEigen
,
6
);
gd
.
addCheckbox
(
"Combine 'other' plane with the current"
,
this
.
plDbgMerge
);
gd
.
addMessage
(
"--- Other debug images ---"
);
gd
.
addCheckbox
(
"Show 'ortho_combine'"
,
this
.
show_ortho_combine
);
...
...
@@ -3113,6 +3117,7 @@ public class EyesisCorrectionParameters {
this
.
plMaxOutliers
=
(
int
)
gd
.
getNextNumber
();
this
.
plMinStrength
=
gd
.
getNextNumber
();
this
.
plMaxEigen
=
gd
.
getNextNumber
();
this
.
plDbgMerge
=
gd
.
getNextBoolean
();
this
.
show_ortho_combine
=
gd
.
getNextBoolean
();
this
.
show_refine_supertiles
=
gd
.
getNextBoolean
();
...
...
src/main/java/SuperTiles.java
View file @
86cdc8a0
...
...
@@ -1067,7 +1067,7 @@ public class SuperTiles{
// final int debug_stile = 18 * stilesX + 25;
// final int debug_stile = 20 * stilesX + 24;
final
int
debug_stile
=
1
7
*
stilesX
+
10
;
final
int
debug_stile
=
1
6
*
stilesX
+
27
;
//
10;
for
(
int
ithread
=
0
;
ithread
<
threads
.
length
;
ithread
++)
{
...
...
@@ -1121,10 +1121,11 @@ public class SuperTiles{
// int dl = ((nsTile >= debug_stile-1) && (nsTile <= debug_stile+1) ) ? 1 : 0;
// int dl = ((stileY == 17) && (stileX > 4)) ? 1 : 0;
// int dl = (stileY >= 0) ? 1 : 0;
int
dl1
=
(
nsTile
==
debug_stile
-
1
)
?
3
:
0
;
int
dl1
=
(
nsTile
==
debug_stile
)
?
3
:
0
;
// int dl = (nsTile == debug_stile) ? 3 : 0;
int
dl
=
((
stileY
>=
15
)
&&
(
stileY
<=
18
)
&&
(
stileX
>=
5
)
&&
(
stileX
<=
31
))
?
1
:
0
;
// int dl = ((stileY == 17) && (stileX == 27) ) ? 3 : 0;
// int dl = ((stileY >= 15) && (stileY <= 18) && (stileX >= 5) && (stileX <= 31)) ? 1 : 0;
int
dl
=
((
stileY
==
16
)
&&
(
stileX
==
27
)
)
?
3
:
0
;
// int debugLevel1 = ((sTileXY[0] == 27) && (sTileXY[1] == 16))? 1: 0; // check why v[0][0] <0
boolean
[]
sel_all
=
stSel
.
clone
();
...
...
@@ -1301,6 +1302,9 @@ public class SuperTiles{
}
if
(
st_planes
.
size
()
>
0
){
planes
[
nsTile
]
=
st_planes
.
toArray
(
new
TilePlanes
.
PlaneData
[
0
]
);
if
(
dl
>
0
){
System
.
out
.
println
(
"processPlanes2(): nsTile="
+
nsTile
);
}
}
}
// if sw >0
...
...
@@ -1325,13 +1329,9 @@ public class SuperTiles{
return
wh
;
}
// public double [][]
TilePlanes
.
PlaneData
[][]
getNeibPlanes
(
final
int
dir
// 0: get from up (N), 1:from NE, ... 7 - from NW
// final double minWeight,
// final double maxEigen,
// final double dispNorm,
// final boolean use_NaN
final
int
dir
,
// 0: get from up (N), 1:from NE, ... 7 - from NW
final
boolean
dbgMerge
// Combine 'other' plane with current
)
{
final
int
tilesX
=
tileProcessor
.
getTilesX
();
...
...
@@ -1340,16 +1340,13 @@ public class SuperTiles{
final
int
tileSize
=
tileProcessor
.
getTileSize
();
final
int
stilesX
=
(
tilesX
+
superTileSize
-
1
)/
superTileSize
;
final
int
stilesY
=
(
tilesY
+
superTileSize
-
1
)/
superTileSize
;
// final int width = stilesX * superTileSize; // * tileSize;
// final int height = stilesY * superTileSize; // * tileSize;
final
double
[]
nan_plane
=
new
double
[
superTileSize
*
superTileSize
];
for
(
int
i
=
0
;
i
<
nan_plane
.
length
;
i
++)
nan_plane
[
i
]
=
Double
.
NaN
;
// final int centerIndex = (superTileSize+1) * superTileSize / 2;
final
int
[][]
dirsYX
=
{{-
1
,
0
},{-
1
,
1
},{
0
,
1
},{
1
,
1
},{
1
,
0
},{
1
,-
1
},{
0
,-
1
},{-
1
,-
1
}};
TilePlanes
.
PlaneData
[][]
neib_planes
=
new
TilePlanes
.
PlaneData
[
stilesY
*
stilesX
][];
TilePlanes
tpl
=
null
;
// new TilePlanes(tileSize,superTileSize, geometryCorrection);
// final int debug_stile =
17
* stilesX + 27;
final
int
debug_stile
=
20
*
stilesX
+
27
;
// final int debug_stile =
20
* stilesX + 27;
final
int
debug_stile
=
17
*
stilesX
+
27
;
for
(
int
sty0
=
0
;
sty0
<
stilesY
;
sty0
++){
int
sty
=
sty0
+
dirsYX
[
dir
][
0
];
...
...
@@ -1377,9 +1374,55 @@ public class SuperTiles{
if
(
nsTile0
==
debug_stile
)
{
System
.
out
.
println
(
"getNeibPlanes(): nsTile0="
+
nsTile0
+
", nsTile="
+
nsTile
+
", np = "
+
np
+
" dir = "
+
dir
);
}
neib_planes
[
nsTile0
][
np
]
=
pd
.
getPlaneToThis
(
TilePlanes
.
PlaneData
other_pd
=
pd
.
getPlaneToThis
(
planes
[
nsTile
][
np
],
// PlaneData otherPd,
(
nsTile0
==
debug_stile
)?
1
:
0
);
// int debugLevel)
int
num_this
=
(
planes
[
nsTile0
]
==
null
)?
0
:(
planes
[
nsTile0
].
length
);
int
best_index
=
0
;
if
(
dbgMerge
&&
(
num_this
>
0
))
{
double
best_value
=
Double
.
NaN
;
if
(
num_this
>
1
){
// find the best candidate for merge
for
(
int
indx
=
1
;
indx
<
planes
[
nsTile0
].
length
;
indx
++){
if
(
nsTile0
==
debug_stile
)
{
System
.
out
.
println
(
"this with this, same weight:"
);
TilePlanes
.
PlaneData
this_this_pd
=
planes
[
nsTile0
][
indx
].
mergePlaneToThis
(
planes
[
nsTile0
][
indx
],
// PlaneData otherPd,
1.0
,
// double scale_other,
true
,
// boolean ignore_weights,
(
nsTile0
==
debug_stile
)?
1
:
0
);
// int debugLevel)
System
.
out
.
println
(
"other with other, same weight:"
);
TilePlanes
.
PlaneData
other_other_pd
=
other_pd
.
mergePlaneToThis
(
other_pd
,
// PlaneData otherPd,
1.0
,
// double scale_other,
true
,
// boolean ignore_weights,
(
nsTile0
==
debug_stile
)?
1
:
0
);
// int debugLevel)
System
.
out
.
println
(
"other with this, same weight:"
);
}
TilePlanes
.
PlaneData
merged_pd
=
planes
[
nsTile0
][
indx
].
mergePlaneToThis
(
other_pd
,
// PlaneData otherPd,
1.0
,
// double scale_other,
true
,
// boolean ignore_weights,
(
nsTile0
==
debug_stile
)?
1
:
0
);
// int debugLevel)
if
(!(
merged_pd
.
getValue
()
>
best_value
))
{
// Double.isNaN(best_value) will work too
best_value
=
merged_pd
.
getValue
();
best_index
=
indx
;
}
}
}
// now merge with weights with the best plane of this supertile
if
(
nsTile0
==
debug_stile
)
{
System
.
out
.
println
(
"this with this, proportional weight, np(other):"
+
np
+
" best fit(this):"
+
best_index
);
}
TilePlanes
.
PlaneData
merged_pd
=
planes
[
nsTile0
][
best_index
].
mergePlaneToThis
(
other_pd
,
// PlaneData otherPd,
1.0
,
// double scale_other,
false
,
// boolean ignore_weights,
(
nsTile0
==
debug_stile
)?
1
:
0
);
// int debugLevel)
neib_planes
[
nsTile0
][
np
]
=
merged_pd
;
}
else
{
neib_planes
[
nsTile0
][
np
]
=
other_pd
;
}
}
}
else
{
neib_planes
[
nsTile0
]
=
null
;
...
...
src/main/java/TilePlanes.java
View file @
86cdc8a0
This diff is collapsed.
Click to expand it.
src/main/java/TileProcessor.java
View file @
86cdc8a0
...
...
@@ -3000,7 +3000,9 @@ public class TileProcessor {
sdfa_instance
.
showArrays
(
plane_data
,
wh
[
0
],
wh
[
1
],
true
,
"plane_data"
);
// show plane data
for
(
int
dr
=
0
;
dr
<
8
;
dr
++){
TilePlanes
.
PlaneData
[][]
planes
=
st
.
getNeibPlanes
(
dr
);
TilePlanes
.
PlaneData
[][]
planes
=
st
.
getNeibPlanes
(
dr
,
clt_parameters
.
plDbgMerge
);
plane_data_nonan
=
st
.
getShowPlanes
(
planes
,
clt_parameters
.
plMinStrength
,
// minWeight,
...
...
Write
Preview
Markdown
is supported
0%
Try again
or
attach a new file
Attach a file
Cancel
You are about to add
0
people
to the discussion. Proceed with caution.
Finish editing this message first!
Cancel
Please
register
or
sign in
to comment