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Commit 56b7ed16 authored by Andrey Filippov's avatar Andrey Filippov
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combining with vignetting correction

parent f96b0aec
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Showing with 483 additions and 110 deletions
src/main/java/EyesisCorrectionParameters.java
View file @ 56b7ed16
......@@ -1801,6 +1801,9 @@ public class EyesisCorrectionParameters {
public boolean skip_sym = false; // do not apply symmetrical correction
public boolean convolve_direct = false; // do not apply symmetrical correction
public double vignetting_max = 0.4; // value in vignetting data to correspond to 1x in the kernel
public double vignetting_range = 3.0; // do not try to correct vignetting less than vignetting_max/vignetting_range
public DCTParameters(
int dct_size,
int asym_size,
......@@ -1852,6 +1855,8 @@ public class EyesisCorrectionParameters {
properties.setProperty(prefix+"normalize", this.normalize+"");
properties.setProperty(prefix+"skip_sym", this.skip_sym+"");
properties.setProperty(prefix+"convolve_direct", this.convolve_direct+"");
properties.setProperty(prefix+"vignetting_max", this.vignetting_max+"");
properties.setProperty(prefix+"vignetting_range", this.vignetting_range+"");
}
public void getProperties(String prefix,Properties properties){
......@@ -1887,6 +1892,8 @@ public class EyesisCorrectionParameters {
if (properties.getProperty(prefix+"normalize")!=null) this.normalize=Boolean.parseBoolean(properties.getProperty(prefix+"normalize"));
if (properties.getProperty(prefix+"skip_sym")!=null) this.skip_sym=Boolean.parseBoolean(properties.getProperty(prefix+"skip_sym"));
if (properties.getProperty(prefix+"convolve_direct")!=null) this.convolve_direct=Boolean.parseBoolean(properties.getProperty(prefix+"convolve_direct"));
if (properties.getProperty(prefix+"vignetting_max")!=null) this.vignetting_max=Double.parseDouble(properties.getProperty(prefix+"vignetting_max"));
if (properties.getProperty(prefix+"vignetting_range")!=null) this.vignetting_range=Double.parseDouble(properties.getProperty(prefix+"vignetting_range"));
}
public boolean showDialog() {
......@@ -1923,7 +1930,10 @@ public class EyesisCorrectionParameters {
gd.addCheckbox ("Normalize both sym and asym kernels ", this.normalize);
gd.addCheckbox ("Do not apply symmetrical (DCT) correction ", this.skip_sym);
gd.addCheckbox ("Convolve directly with symmetrical kernel (debug feature) ", this.convolve_direct);
gd.addNumericField("Value (max) in vignetting data to correspond to 1x in the kernel",this.vignetting_max, 3);
gd.addNumericField("Do not try to correct vignetting smaller than this fraction of max",this.vignetting_range, 3);
WindowTools.addScrollBars(gd);
gd.showDialog();
if (gd.wasCanceled()) return false;
......@@ -1959,6 +1969,8 @@ public class EyesisCorrectionParameters {
this.normalize= gd.getNextBoolean();
this.skip_sym= gd.getNextBoolean();
this.convolve_direct= gd.getNextBoolean();
this.vignetting_max= gd.getNextNumber();
this.vignetting_range= gd.getNextNumber();
// MASTER_DEBUG_LEVEL= (int) gd.getNextNumber();
return true;
}
......
src/main/java/EyesisCorrections.java
View file @ 56b7ed16
......@@ -2234,7 +2234,8 @@ public class EyesisCorrections {
return mask;
}
/* ======================================================================== */
private void saveAndShow(
// private void saveAndShow(
public void saveAndShow(
ImagePlus imp,
EyesisCorrectionParameters.CorrectionParameters correctionsParameters){
saveAndShowEnable( imp, correctionsParameters , true, true);
......@@ -2254,6 +2255,7 @@ public class EyesisCorrections {
}
private void saveAndShow(
// public void saveAndShow(
ImagePlus imp,
EyesisCorrectionParameters.CorrectionParameters correctionsParameters,
boolean save,
......
src/main/java/EyesisDCT.java
View file @ 56b7ed16
This diff is collapsed.
src/main/java/Eyesis_Correction.java
View file @ 56b7ed16
......@@ -462,6 +462,8 @@ private Panel panel1,panel2,panel3,panel4,panel5,panel5a, panel6,panel7,panelPos
addButton("Select kernels image", panelDct1, color_configure);
addButton("Create DCT kernels", panelDct1, color_process);
addButton("Read DCT kernels", panelDct1, color_process);
addButton("Setup DCT parameters", panelDct1, color_configure);
addButton("DCT process files", panelDct1, color_process);
add(panelDct1);
}
pack();
......@@ -2781,8 +2783,110 @@ private Panel panel1,panel2,panel3,panel4,panel5,panel5a, panel6,panel7,panelPos
true,
DBG_IMP.getTitle()+"-IDCTDC");
return;
/* ======================================================================== */
} else if (label.equals("Setup DCT parameters")) {
DCT_PARAMETERS.showDialog();
return;
/* ======================================================================== */
} else if (label.equals("DCT process files")) {
DEBUG_LEVEL=MASTER_DEBUG_LEVEL;
EYESIS_CORRECTIONS.setDebug(DEBUG_LEVEL);
if (EYESIS_DCT == null){
EYESIS_DCT = new EyesisDCT (
EYESIS_CORRECTIONS,
CORRECTION_PARAMETERS,
DCT_PARAMETERS);
if (DEBUG_LEVEL > 0){
System.out.println("Created new EyesisDCT instance, will need to read DCT kernels");
}
}
String configPath=null;
if (EYESIS_CORRECTIONS.correctionsParameters.saveSettings) {
configPath=EYESIS_CORRECTIONS.correctionsParameters.selectResultsDirectory(
true,
true);
if (configPath==null){
String msg="No results directory selected, command aborted";
System.out.println("Warning: "+msg);
IJ.showMessage("Warning",msg);
return;
}
configPath+=Prefs.getFileSeparator()+"autoconfig";
try {
saveTimestampedProperties(
configPath, // full path or null
null, // use as default directory if path==null
true,
PROPERTIES);
} catch (Exception e){
String msg="Failed to save configuration to "+configPath+", command aborted";
System.out.println("Error: "+msg);
IJ.showMessage("Error",msg);
return;
}
}
EYESIS_CORRECTIONS.initSensorFiles(DEBUG_LEVEL);
int numChannels=EYESIS_CORRECTIONS.getNumChannels();
NONLIN_PARAMETERS.modifyNumChannels(numChannels);
CHANNEL_GAINS_PARAMETERS.modifyNumChannels(numChannels);
/*
if (CORRECTION_PARAMETERS.deconvolve && (NONLIN_PARAMETERS.noiseGainPower!=0)) {
EYESIS_CORRECTIONS.updateImageNoiseGains(
NONLIN_PARAMETERS, //EyesisCorrectionParameters.NonlinParameters nonlinParameters,
CONVOLVE_FFT_SIZE, //int fftSize, // 128 - fft size, kernel size should be size/2
THREADS_MAX, // int threadsMax, // maximal number of threads to launch
UPDATE_STATUS, // boolean updateStatus,
DEBUG_LEVEL); //int globalDebugLevel){
}
*/
if (!EYESIS_DCT.DCTKernelsAvailable()){
if (DEBUG_LEVEL > 0){
System.out.println("Reading/converting DCT kernels");
}
EYESIS_DCT.readDCTKernels(
DCT_PARAMETERS,
CONVOLVE_FFT_SIZE/2,
THREADS_MAX,
UPDATE_STATUS, // update status info
DEBUG_LEVEL);
if (DEBUG_LEVEL > 1){
EYESIS_DCT.showKernels(); // show restored kernels
}
}
// EYESIS_CORRECTIONS.processChannelImages(
EYESIS_DCT.processDCTChannelImages(
// SPLIT_PARAMETERS, // EyesisCorrectionParameters.SplitParameters splitParameters,
DCT_PARAMETERS, // EyesisCorrectionParameters.DCTParameters dct_parameters,
DEBAYER_PARAMETERS, //EyesisCorrectionParameters.DebayerParameters debayerParameters,
NONLIN_PARAMETERS, //EyesisCorrectionParameters.NonlinParameters nonlinParameters,
COLOR_PROC_PARAMETERS, //EyesisCorrectionParameters.ColorProcParameters colorProcParameters,
CHANNEL_GAINS_PARAMETERS, //CorrectionColorProc.ColorGainsParameters channelGainParameters,
RGB_PARAMETERS, //EyesisCorrectionParameters.RGBParameters rgbParameters,
EQUIRECTANGULAR_PARAMETERS, // EyesisCorrectionParameters.EquirectangularParameters equirectangularParameters,
CONVOLVE_FFT_SIZE, //int convolveFFTSize, // 128 - fft size, kernel size should be size/2
THREADS_MAX, //final int threadsMax, // maximal number of threads to launch
UPDATE_STATUS, //final boolean updateStatus,
DEBUG_LEVEL); //final int debugLevel);
if (configPath!=null) {
saveTimestampedProperties( // save config again
configPath, // full path or null
null, // use as default directory if path==null
true,
PROPERTIES);
}
return;
/* ======================================================================== */
} else if (label.equals("DCT test 3")) {
DEBUG_LEVEL=MASTER_DEBUG_LEVEL;
int n = 32;
......@@ -3397,6 +3501,9 @@ private Panel panel1,panel2,panel3,panel4,panel5,panel5a, panel6,panel7,panelPos
EYESIS_DCT.createDCTKernels(
DCT_PARAMETERS,
/*
EYESIS_CORRECTIONS.pixelMapping,
*/
CONVOLVE_FFT_SIZE/2,
THREADS_MAX,
UPDATE_STATUS, // update status info
......
src/main/java/ImageDtt.java
View file @ 56b7ed16
......@@ -529,7 +529,7 @@ public class ImageDtt {
}
if ((tileY == debug_tileY) && (tileX == debug_tileX) && (color == 2)) {
if ((dct_kernels!=null) && (tileY == debug_tileY) && (tileX == debug_tileX) && (color == 2)) {
double [][] dbg_tile = {
dct_kernels.st_direct[color][kernelTileY][kernelTileX],
dct_kernels.st_kernels[color][kernelTileY][kernelTileX],
......
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