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Elphel
imagej-elphel
Commits
4880cb21
Commit
4880cb21
authored
Sep 29, 2018
by
Andrey Filippov
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Plain Diff
Debugging conversion to GPU
parent
3972a933
Changes
3
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Inline
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Showing
3 changed files
with
130 additions
and
4 deletions
+130
-4
ImageDtt.java
src/main/java/ImageDtt.java
+2
-1
TwoQuadCLT.java
src/main/java/TwoQuadCLT.java
+119
-2
dtt8x8.cuh
src/main/resources/dtt8x8.cuh
+9
-1
No files found.
src/main/java/ImageDtt.java
View file @
4880cb21
...
@@ -4672,7 +4672,8 @@ public class ImageDtt {
...
@@ -4672,7 +4672,8 @@ public class ImageDtt {
int
[]
overexp_all
)
// {number of overexposed, number of all tiles} or null
int
[]
overexp_all
)
// {number of overexposed, number of all tiles} or null
{
{
boolean
debug_fpga
=
debugLevel
<
-
9
;
// boolean debug_fpga = debugLevel < -9;
boolean
debug_fpga
=
(
debugLevel
<
-
9
)
||
(
debugLevel
==
2
);
if
(
debug_fpga
)
debugLevel
=
1
;
if
(
debug_fpga
)
debugLevel
=
1
;
boolean
use_kernels
=
(
clt_kernels
!=
null
)
&&
!
dbg_no_deconvolution
;
boolean
use_kernels
=
(
clt_kernels
!=
null
)
&&
!
dbg_no_deconvolution
;
...
...
src/main/java/TwoQuadCLT.java
View file @
4880cb21
...
@@ -26,6 +26,10 @@ import java.io.FileNotFoundException;
...
@@ -26,6 +26,10 @@ import java.io.FileNotFoundException;
import
java.io.FileOutputStream
;
import
java.io.FileOutputStream
;
import
java.io.IOException
;
import
java.io.IOException
;
import
java.io.OutputStream
;
import
java.io.OutputStream
;
import
java.nio.ByteBuffer
;
import
java.nio.ByteOrder
;
import
java.nio.channels.Channels
;
import
java.nio.channels.WritableByteChannel
;
import
java.nio.file.Files
;
import
java.nio.file.Files
;
import
java.nio.file.StandardCopyOption
;
import
java.nio.file.StandardCopyOption
;
import
java.util.ArrayList
;
import
java.util.ArrayList
;
...
@@ -913,6 +917,111 @@ public class TwoQuadCLT {
...
@@ -913,6 +917,111 @@ public class TwoQuadCLT {
double
[][][]
image_data
,
double
[][][]
image_data
,
double
[][][]
port_xy
,
double
[][][]
port_xy
,
boolean
transpose
)
throws
IOException
{
boolean
transpose
)
throws
IOException
{
if
(
clt_kernels
!=
null
)
{
for
(
int
chn
=
0
;
chn
<
clt_kernels
.
length
;
chn
++)
{
String
kern_path
=
file_prefix
+
"_chn"
+
chn
+(
transpose
?
"_transposed"
:
""
)+
".kernel"
;
String
offs_path
=
file_prefix
+
"_chn"
+
chn
+(
transpose
?
"_transposed"
:
""
)+
".kernel_offsets"
;
FileOutputStream
fos
=
new
FileOutputStream
(
kern_path
);
DataOutputStream
dos
=
new
DataOutputStream
(
fos
);
WritableByteChannel
channel
=
Channels
.
newChannel
(
dos
);
int
float_buffer_size
=
clt_kernels
[
chn
].
length
*
clt_kernels
[
chn
][
0
].
length
*
clt_kernels
[
chn
][
0
][
0
].
length
*
4
*
64
;
ByteBuffer
bb
=
ByteBuffer
.
allocate
(
float_buffer_size
*
4
);
bb
.
order
(
ByteOrder
.
LITTLE_ENDIAN
);
bb
.
clear
();
for
(
int
ty
=
0
;
ty
<
clt_kernels
[
chn
][
0
].
length
;
ty
++)
{
for
(
int
tx
=
0
;
tx
<
clt_kernels
[
chn
][
0
][
ty
].
length
;
tx
++)
{
for
(
int
col
=
0
;
col
<
clt_kernels
[
chn
].
length
;
col
++)
{
for
(
int
p
=
0
;
p
<
4
;
p
++)
{
double
[]
pa
=
clt_kernels
[
chn
][
col
][
ty
][
tx
][
p
];
for
(
int
i0
=
0
;
i0
<
64
;
i0
++)
{
int
i
;
if
(
transpose
)
{
i
=
((
i0
&
7
)
<<
3
)
+
((
i0
>>
3
)
&
7
);
}
else
{
i
=
i0
;
}
// dos.writeFloat((float)pa[i]);
bb
.
putFloat
((
float
)
pa
[
i
]);
}
}
}
}
}
bb
.
flip
();
channel
.
write
(
bb
);
dos
.
close
();
fos
=
new
FileOutputStream
(
offs_path
);
dos
=
new
DataOutputStream
(
fos
);
channel
=
Channels
.
newChannel
(
dos
);
float_buffer_size
=
clt_kernels
[
chn
][
0
].
length
*
clt_kernels
[
chn
][
0
].
length
*
clt_kernels
[
chn
][
0
][
0
].
length
*
4
*
clt_kernels
[
chn
][
0
][
0
][
0
][
4
].
length
;
bb
=
ByteBuffer
.
allocate
(
float_buffer_size
*
4
);
bb
.
order
(
ByteOrder
.
LITTLE_ENDIAN
);
bb
.
clear
();
for
(
int
ty
=
0
;
ty
<
clt_kernels
[
chn
][
0
].
length
;
ty
++)
{
for
(
int
tx
=
0
;
tx
<
clt_kernels
[
chn
][
0
][
ty
].
length
;
tx
++)
{
for
(
int
col
=
0
;
col
<
clt_kernels
[
chn
].
length
;
col
++)
{
double
[]
pa
=
clt_kernels
[
chn
][
col
][
ty
][
tx
][
4
];
for
(
int
i
=
0
;
i
<
pa
.
length
;
i
++)
{
// dos.writeFloat((float)pa[i]);
bb
.
putFloat
((
float
)
pa
[
i
]);
}
}
}
}
bb
.
flip
();
channel
.
write
(
bb
);
dos
.
close
();
}
}
if
(
image_data
!=
null
)
{
for
(
int
chn
=
0
;
chn
<
image_data
.
length
;
chn
++)
{
String
img_path
=
file_prefix
+
"_chn"
+
chn
+
".bayer"
;
FileOutputStream
fos
=
new
FileOutputStream
(
img_path
);
DataOutputStream
dos
=
new
DataOutputStream
(
fos
);
WritableByteChannel
channel
=
Channels
.
newChannel
(
dos
);
ByteBuffer
bb
=
ByteBuffer
.
allocate
(
image_data
[
chn
][
0
].
length
*
4
);
bb
.
order
(
ByteOrder
.
LITTLE_ENDIAN
);
bb
.
clear
();
for
(
int
i
=
0
;
i
<
image_data
[
chn
][
0
].
length
;
i
++)
{
// dos.writeFloat((float) (image_data[chn][0][i] + image_data[chn][1][i] + image_data[chn][2][i]));
bb
.
putFloat
((
float
)
(
image_data
[
chn
][
0
][
i
]
+
image_data
[
chn
][
1
][
i
]
+
image_data
[
chn
][
2
][
i
]));
}
bb
.
flip
();
channel
.
write
(
bb
);
dos
.
close
();
}
}
if
(
port_xy
!=
null
)
{
for
(
int
chn
=
0
;
chn
<
port_xy
[
0
].
length
;
chn
++)
{
String
img_path
=
file_prefix
+
"_chn"
+
chn
+
".portsxy"
;
FileOutputStream
fos
=
new
FileOutputStream
(
img_path
);
DataOutputStream
dos
=
new
DataOutputStream
(
fos
);
WritableByteChannel
channel
=
Channels
.
newChannel
(
dos
);
ByteBuffer
bb
=
ByteBuffer
.
allocate
(
port_xy
.
length
*
2
*
4
);
bb
.
order
(
ByteOrder
.
LITTLE_ENDIAN
);
bb
.
clear
();
for
(
int
i
=
0
;
i
<
port_xy
.
length
;
i
++)
{
// dos.writeFloat((float) (port_xy[i][chn][0])); // x-offset
// dos.writeFloat((float) (port_xy[i][chn][1])); // y-offset
bb
.
putFloat
((
float
)
(
port_xy
[
i
][
chn
][
0
]));
// x-offset
bb
.
putFloat
((
float
)
(
port_xy
[
i
][
chn
][
1
]));
// y-offset
}
bb
.
flip
();
channel
.
write
(
bb
);
dos
.
close
();
}
}
}
public
void
saveFloatKernelsBigEndian
(
String
file_prefix
,
double
[][][][][][]
clt_kernels
,
double
[][][]
image_data
,
double
[][][]
port_xy
,
boolean
transpose
)
throws
IOException
{
if
(
clt_kernels
!=
null
)
{
if
(
clt_kernels
!=
null
)
{
for
(
int
chn
=
0
;
chn
<
clt_kernels
.
length
;
chn
++)
{
for
(
int
chn
=
0
;
chn
<
clt_kernels
.
length
;
chn
++)
{
String
kern_path
=
file_prefix
+
"_chn"
+
chn
+(
transpose
?
"_transposed"
:
""
)+
".kernel"
;
String
kern_path
=
file_prefix
+
"_chn"
+
chn
+(
transpose
?
"_transposed"
:
""
)+
".kernel"
;
...
@@ -983,6 +1092,7 @@ public class TwoQuadCLT {
...
@@ -983,6 +1092,7 @@ public class TwoQuadCLT {
}
}
public
ImagePlus
[]
processCLTQuadCorrPairGpu
(
public
ImagePlus
[]
processCLTQuadCorrPairGpu
(
GPUTileProcessor
gPUTileProcessor
,
GPUTileProcessor
gPUTileProcessor
,
QuadCLT
quadCLT_main
,
QuadCLT
quadCLT_main
,
...
@@ -1091,8 +1201,10 @@ public class TwoQuadCLT {
...
@@ -1091,8 +1201,10 @@ public class TwoQuadCLT {
dst_bayer
[
nc
][
i
]=
nc
*
main_bayer
[
nc
].
length
+
i
;
dst_bayer
[
nc
][
i
]=
nc
*
main_bayer
[
nc
].
length
+
i
;
}
}
}
}
/*
int iwidth = imp_quad_main[0].getWidth();
int iwidth = imp_quad_main[0].getWidth();
String [] dbg_titles= {"src0","dst0","src1","dst1","src2","dst2","src3","dst3"};
String [] dbg_titles= {"src0","dst0","src1","dst1","src2","dst2","src3","dst3"};
for (int nc = 0; nc < main_bayer.length; nc++) {
for (int nc = 0; nc < main_bayer.length; nc++) {
gPUTileProcessor.exec_dtt24(
gPUTileProcessor.exec_dtt24(
main_bayer[nc], // float src_pixels[],
main_bayer[nc], // float src_pixels[],
...
@@ -1109,7 +1221,7 @@ public class TwoQuadCLT {
...
@@ -1109,7 +1221,7 @@ public class TwoQuadCLT {
"converted",
"converted",
dbg_titles);
dbg_titles);
*/
double
[][][]
port_xy_main_dbg
=
new
double
[
tilesX
*
tilesY
][][];
double
[][][]
port_xy_main_dbg
=
new
double
[
tilesX
*
tilesY
][][];
double
[][][]
port_xy_aux_dbg
=
new
double
[
tilesX
*
tilesY
][][];
double
[][][]
port_xy_aux_dbg
=
new
double
[
tilesX
*
tilesY
][][];
...
@@ -1149,8 +1261,13 @@ public class TwoQuadCLT {
...
@@ -1149,8 +1261,13 @@ public class TwoQuadCLT {
port_xy_main_dbg
,
// final double [][][] port_xy_main_dbg, // for each tile/port save x,y pixel coordinates (gpu code development)
port_xy_main_dbg
,
// final double [][][] port_xy_main_dbg, // for each tile/port save x,y pixel coordinates (gpu code development)
port_xy_aux_dbg
);
// final double [][][] port_xy_aux_dbg) // for each tile/port save x,y pixel coordinates (gpu code development)
port_xy_aux_dbg
);
// final double [][][] port_xy_aux_dbg) // for each tile/port save x,y pixel coordinates (gpu code development)
if
(
debugLevel
<
-
1000
)
{
return
null
;
}
String
kernel_dir
=
"/home/eyesis/workspace-python3/nvidia_dct8x8/clt/"
;
String
kernel_dir
=
"/home/eyesis/workspace-python3/nvidia_dct8x8/clt/"
;
boolean
[][]
what_to_save
=
{{
false
,
false
,
true
},
{
false
,
false
,
true
}};
// boolean [][] what_to_save = {{false,false,true}, {false,false,true}};
boolean
[][]
what_to_save
=
{{
true
,
true
,
true
},
{
true
,
true
,
true
}};
try
{
try
{
saveFloatKernels
(
saveFloatKernels
(
kernel_dir
+
"main"
,
// String file_prefix,
kernel_dir
+
"main"
,
// String file_prefix,
...
...
src/main/resources/dtt8x8.cuh
View file @
4880cb21
...
@@ -18,8 +18,16 @@
...
@@ -18,8 +18,16 @@
**
**
** You should have received a copy of the GNU General Public License
** You should have received a copy of the GNU General Public License
** along with this program. If not, see <http://www.gnu.org/licenses/>.
** along with this program. If not, see <http://www.gnu.org/licenses/>.
** -----------------------------------------------------------------------------**
**
**
** Additional permission under GNU GPL version 3 section 7
**
** If you modify this Program, or any covered work, by linking or
** combining it with NVIDIA Corporation's CUDA libraries from the
** NVIDIA CUDA Toolkit (or a modified version of those libraries),
** containing parts covered by the terms of NVIDIA CUDA Toolkit
** EULA, the licensors of this Program grant you additional
** permission to convey the resulting work.
** -----------------------------------------------------------------------------**
*/
*/
/**
/**
...
...
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