Working snapshot before implementing pull to average terrain temperature

src/main/java/com/elphel/imagej/correction/Eyesis_Correction.java

@@ -474,12 +474,6 @@ public class Eyesis_Correction implements PlugIn, ActionListener {
 	public ImagePlus CORRELATE_IMP = null;
 	public TensorflowInferModel TENSORFLOW_INFER_MODEL = null;
 
-	public class SyncCommand {
-		public boolean isRunning = false;
-		public AtomicInteger stopRequested = new AtomicInteger(0); // 0 - not requested, 1 - ASAP, 2 - gracefully
-		public String buttonLabel = "";
-	}
-
 	@Override
 	public void run(String arg) {
 		String options = Macro.getOptions();
@@ -5803,10 +5797,12 @@ public class Eyesis_Correction implements PlugIn, ActionListener {
 			OrangeTest.processMerged();			
 		} else if (label.equals("Vegetation LMA")) {
 			VegetationModel.processVegetation(
+					SYNC_COMMAND, // // SyncCommand  SYNC_COMMAND,
 					CLT_PARAMETERS, //CLTParameters    clt_parameters,
 					false); //boolean combine_segments);			
 		} else if (label.equals("Combine LMA Segments")) {
 			VegetationModel.processVegetation(
+					SYNC_COMMAND, // // SyncCommand  SYNC_COMMAND,
 					CLT_PARAMETERS, //CLTParameters    clt_parameters,
 					true); //boolean combine_segments);			
 		}

src/main/java/com/elphel/imagej/correction/SyncCommand.java

+package com.elphel.imagej.correction;
+
+import java.util.concurrent.atomic.AtomicInteger;
+
+public class SyncCommand {
+	public boolean isRunning = false;
+	public AtomicInteger stopRequested = new AtomicInteger(0); // 0 - not requested, 1 - ASAP, 2 - gracefully
+	public String buttonLabel = "";
+}
\ No newline at end of file

src/main/java/com/elphel/imagej/tileprocessor/Interscene.java

@@ -2486,7 +2486,7 @@ public class Interscene {
 		int last_processed_scene = -2; // none
 		/*
 		 * There is still a problem with a large mismatch at start position for far off-reference scenes,
-		 * especiall those that were not refined after inversion - reversing order of earlier processed "later"
+		 * especially those that were not refined after inversion - reversing order of earlier processed "later"
 		 * half (after the reference in the center) earlier processed as the bottom half of the other sub-sequence.
 		 * 
 		 * For mitigation we'll use that both half-sequences start from the center with small mismatches. The
@@ -3006,7 +3006,7 @@ public class Interscene {
 		if (ref_disparity == null) { 
 			ref_disparity = quadCLTs[ref_index].getDLS()[use_lma_dsi?1:0];
 		}
-		
+		smooth_disparity=true;
 		if (smooth_disparity) {
 			double [] dbg_disparity =  (debugLevel > 2) ? ref_disparity.clone() : null;
 			boolean [] dbg_reliable = ((dbg_disparity != null) && (reliable_ref != null)) ?  reliable_ref.clone(): null;