This patch adjusts some problems regarding image sizes in LaTeX output of doxygen (a.o. Bug 738299 - When using msc or PlantUML, the default latex for the created image should include [width=\linewidth]) this has been done is such a way that all the "image" commands (i.e. image, dot, dotfile, msc, mscfile, diafile, startuml) operate in a similar way / have the same possibilities.

- commands.doc
Adjusted documentation to reflect changes.

- cmdmapper.cpp
- cmdmapper.h
Added utility function to map command id back to command name

- doctokenizer.h
- doctokenizer.l
Handle Caption  and Size indication. Required also that some other rules had to be tightened a bit (like usage of {} in startuml and usage of "" for captions. This was already described in the documentation in this way).

- docparser.cpp
- docparser.h
Created routine to uniformly handle the Caption and size indications and store them in a general way.

- latexgen.cpp
Replaced graphicx package by adjustbox package (includes graphicx) to support "min width" etc.

- doxygen.sty templates\latex
Added commands to make commands with and without caption behave similar.

- docbookvisitor.cpp
- docbookvisitor.h
- htmldocvisitor.cpp
- latexdocvisitor.cpp
- latexdocvisitor.h
- printdocvisitor.h
- xmldocvisitor.cpp
Created routine to uniformly handle the Caption and size indications in a general way.

- indexpage.xml (testing\022)
- indexpage.xml (testing\031)
- class_receiver.xml (testing\037)
- class_sender.xml (testing\037)
Adjusted example output.

Remove dependency of PLantUML on HAVE_DOT

Bug 738574 - … is replaced by \cdots rather than \dots in the LaTeX output

Bug 738548 - latex: dead links to source code

Updated configuration script and libdoxygen.pro.in to use llvm-config

Last comment of \code{.f90} missing

Package mathptmx gives discrepancy between pdf and HTML formulas

Seen the discussion with the pull request 229 the dependency of PlantUML and HAVE dot should be removed.

Changed the \cdots to \dots. Based on the bug report and on http://tex.stackexchange.com/questions/77737/dots-versus-ldots-is-there-a-difference

For Latex an extra dependency exists. In case Latex is set and LATEX_SOURCE_CODE is not set the writing of the "Definition in file" section is disabled.

This is needed on platforms like ubuntu 14.04 where several version of
clang can be installed, and the version is included in the location. The
best way is to use the llvm-config if available

Bug 738063 - Fortran attribute contiguous not identified

Empty entry in \tableofcontents in case e.g. section without description

Generate error message in case bibtex generation fails

In case e.g. an number of Fortran variables are documented as an example in a \code block and the last line looks like:
INTEGER :: var !< documentation
The "!< documentation" is missing as the last block was not rendered.
Note: STRIP_CODE_COMMENTS has to be NO as otherwise the code comment will anyway, correctly,  be absent.

Added keywords contiguous and volatile

In case a section, subsection etc just has a tag and not a description in the \tableofcontents there is nothing mentioned. With this patch the tag is used as description when no description is present, as is done on other places as well (consistency and no empty items in the \tableofcontents).

In case bibtex fails no message is given. When perl is missing the OS just emits an message. With this patch doxygen logs a message (analogous to other calls to portable_system)

When using the mathcal command in formulas the mathptmx package gives in the different output version different letters.
When the mathptmx, more exuberant,  type of fonts are to be used they can be added by means of the EXTRA_PACKAGES option for the dot version.