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python3-imagej-tiff
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Elphel
python3-imagej-tiff
Commits
937842a1
Commit
937842a1
authored
Jul 11, 2018
by
Oleg Dzhimiev
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plot values
parent
2a60124c
Changes
1
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1 changed file
with
22 additions
and
6 deletions
+22
-6
imagej_tiff.py
imagej_tiff.py
+22
-6
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imagej_tiff.py
View file @
937842a1
...
@@ -245,7 +245,6 @@ class imagej_tiff:
...
@@ -245,7 +245,6 @@ class imagej_tiff:
#tmp_im = Image.fromarray(t)
#tmp_im = Image.fromarray(t)
#tmp_im.show()
#tmp_im.show()
# puts etrees in infoss
# puts etrees in infoss
def
__parse_info
(
self
):
def
__parse_info
(
self
):
...
@@ -317,14 +316,14 @@ if __name__ == "__main__":
...
@@ -317,14 +316,14 @@ if __name__ == "__main__":
print
(
bcolors
.
BOLDWHITE
+
"time: "
+
str
(
time
.
time
())
+
bcolors
.
ENDC
)
print
(
bcolors
.
BOLDWHITE
+
"time: "
+
str
(
time
.
time
())
+
bcolors
.
ENDC
)
print
(
ijt
.
labels
)
print
(
"TIFF stack labels: "
+
str
(
ijt
.
labels
)
)
print
(
ijt
.
infos
)
#
print(ijt.infos)
rough_string
=
ET
.
tostring
(
ijt
.
infos
[
0
],
"utf-8"
)
rough_string
=
ET
.
tostring
(
ijt
.
infos
[
0
],
"utf-8"
)
reparsed
=
minidom
.
parseString
(
rough_string
)
reparsed
=
minidom
.
parseString
(
rough_string
)
print
(
reparsed
.
toprettyxml
(
indent
=
"
\t
"
))
print
(
reparsed
.
toprettyxml
(
indent
=
"
\t
"
))
print
(
ijt
.
props
)
#
print(ijt.props)
# needed properties:
# needed properties:
print
(
"Tiles shape: "
+
str
(
ijt
.
tileW
)
+
"x"
+
str
(
ijt
.
tileH
))
print
(
"Tiles shape: "
+
str
(
ijt
.
tileW
)
+
"x"
+
str
(
ijt
.
tileH
))
...
@@ -347,6 +346,23 @@ if __name__ == "__main__":
...
@@ -347,6 +346,23 @@ if __name__ == "__main__":
values
=
ijt
.
getvalues
(
label
=
'other'
)
values
=
ijt
.
getvalues
(
label
=
'other'
)
print
(
"Stack of values shape: "
+
str
(
values
.
shape
))
print
(
"Stack of values shape: "
+
str
(
values
.
shape
))
# each tile's disparity:
fig
=
plt
.
figure
()
fig
.
suptitle
(
"Estimated Disparity"
)
plt
.
imshow
(
values
[:,:,
0
])
plt
.
colorbar
()
fig
=
plt
.
figure
()
fig
.
suptitle
(
"Residual disparity"
)
plt
.
imshow
(
values
[:,:,
1
])
plt
.
colorbar
()
fig
=
plt
.
figure
()
fig
.
suptitle
(
"Residual disparity confidence"
)
plt
.
imshow
(
values
[:,:,
2
])
plt
.
colorbar
()
print
(
bcolors
.
BOLDWHITE
+
"time: "
+
str
(
time
.
time
())
+
bcolors
.
ENDC
)
print
(
bcolors
.
BOLDWHITE
+
"time: "
+
str
(
time
.
time
())
+
bcolors
.
ENDC
)
#print(values)
#print(values)
...
@@ -383,8 +399,8 @@ if __name__ == "__main__":
...
@@ -383,8 +399,8 @@ if __name__ == "__main__":
#ijt.show_images(['X-corr','Y-corr'])
#ijt.show_images(['X-corr','Y-corr'])
#ijt.show_images(['R-vign',3])
#ijt.show_images(['R-vign',3])
#ijt.show_images(
)
ijt
.
show_images
([
0
]
)
#
plt.show()
plt
.
show
()
...
...
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